Methanothrix soehngenii: MCON_0432
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Entry
MCON_0432 CDS
T01468
Name
(GenBank) phosphoesterase, RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03410
Base excision repair
mcj03430
Mismatch repair
mcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCON_0432
03430 Mismatch repair
MCON_0432
03440 Homologous recombination
MCON_0432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcj03400
]
MCON_0432
DNA repair and recombination proteins [BR:
mcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MCON_0432
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MCON_0432
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MCON_0432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AEB67289
UniProt:
F4BWH2
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All DBs
Position
complement(378809..380254)
Genome browser
AA seq
481 aa
AA seq
DB search
MAKGADAMDISLKLDKLKELCKDCTDSICRQKEILVVSHVDADGLTAAAIICAALDRHNI
DYKPLFFRQLDENALEEVADQGADLVIFTDLGSGMIQEILERNLQAIVADHHKPKACPAQ
PLAHINPHLVGADGANQLSGSGSAFLLARALASSPGANDDLAALAVVGAVGDLQDMASGQ
LIGLNRYILDIGSRAGAVHFSRDIKLFGKQTRPVYKMLEYSQDPYLPGLSGKEDACIAFL
KEVGISLGGEKWRRWIDLSQEEKASLVTAIVQKGLRNGISNIRLERLIGEVYILLKEREG
TELRDASEYSTLLNATARYGHAGVGLEVCLGDRDKAFNEAHTLLGQHRQNLVAGLKLVSK
RGITPLNSIQYFDAGDAILDTIIGIVAGMSFQMADRSRPILAFAQNVEGDLKVSARGTQD
LVRSGLDLAHALSLSAQAVGGVGGGHNVAAGATIPLQAKQEFLEKMDRIVAEQLSCKNNI
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggggcagatgccatggacatatccctgaagctcgataagctgaaggagcta
tgcaaagactgcactgattctatctgcaggcaaaaggagattttggttgtctcccatgtg
gatgcagatgggctcaccgctgctgccataatatgcgccgccctggataggcataacatc
gactacaagcccctcttcttccggcagcttgatgagaacgctctggaggaggttgccgac
cagggtgcggatctggtcatattcaccgatctgggcagcgggatgatccaggagatcctg
gagaggaacctgcaggccatcgtagccgatcatcataagcccaaagcctgcccagcacaa
cccctggcccacatcaaccctcatctggtgggagcagatggagcaaaccagcttagcggc
agcggtagcgcttttctcctggccagagccctggcatccagccctggcgctaacgacgat
ctggcagctttagcggtggtgggggcggtgggagacctgcaggatatggccagcggtcag
cttatcggtctgaaccgctacatcctggacataggctcaagagcaggagcagtccatttc
tccagagacatcaagctctttggcaaacagacccgcccggtctacaagatgctggagtac
tcccaggatccataccttcccggcctctcaggaaaagaggacgcctgcattgcatttctt
aaggaggtgggaataagcctgggtggagagaagtggaggcgctggatagatctcagccag
gaggagaaggcctcattggtcacagccatcgttcagaaagggctgcgcaatggcatttcc
aatatcaggctggaaaggctgatcggagaggtctatatcctgctgaaggagagggaggga
accgagctcagagacgcctctgagtactccaccctgctgaacgccaccgcccgttatggt
catgccggggtggggctggaggtctgcctgggagatagggataaggccttcaatgaagcc
cataccctcctgggccagcaccgccagaacctggtggctggcttgaagctggtttcaaag
aggggaatcaccccattgaacagcatccagtacttcgacgccggagatgcgattttggat
acgataataggaatcgtggccggcatgagcttccagatggcagaccgcagccggcctatc
ctcgcttttgctcagaatgtggaaggggatctcaaggtatctgcccggggtacccaggat
ctggtccgctccggcctggacctggcacatgccctatccctctccgcccaggcggttgga
ggggtgggcggaggccataacgtcgccgccggagcgaccattcctctgcaggcaaaacag
gaattcctggaaaagatggaccgcatcgtggccgagcagctttcctgcaaaaataatata
aaataa
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