Methanothrix soehngenii: MCON_1025
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Entry
MCON_1025 CDS
T01468
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mcj
Methanothrix soehngenii
Pathway
mcj00220
Arginine biosynthesis
mcj00240
Pyrimidine metabolism
mcj00250
Alanine, aspartate and glutamate metabolism
mcj01100
Metabolic pathways
mcj01110
Biosynthesis of secondary metabolites
mcj01240
Biosynthesis of cofactors
Module
mcj_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
MCON_1025 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MCON_1025 (carB)
00220 Arginine biosynthesis
MCON_1025 (carB)
Enzymes [BR:
mcj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
MCON_1025 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
GARS_A
ATP-grasp_5
RimK
Epimerase
Motif
Other DBs
NCBI-ProteinID:
AEB67774
UniProt:
F4BZ75
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All DBs
Position
complement(876253..879495)
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AA seq
1080 aa
AA seq
DB search
MPKRADIHKVLLIGSGPIQIGQAAEFDFSGSQACKSLREEGIEVVLVNSNPATIMTDPDT
ADKVYIEPLEPDIVAKIIEKERPDGIIAGIGGQTGLNITSELAEMGILEKYNVEVLGTSV
KSIQEAEDRDLFKQAMQKVGEPVPESRAVNTLDEALEVMEELGLPLVVRPAYTLGGSGGG
IAKTREELLQICDLGLKRSRISQVLLEESVGGWTELEYEVMRDSNDTCITICNMENMDPM
GIHTGESIVVTPIQTLTDHEIQMLRSAAINIIRALKIEGGCNIQFAVKDGEYRVIEVNPR
VSRSSALASKATGYPIARVTAKIAIGMTLDEIRNDVTRETPASFEPMVDYVVAKIPRWPF
DKFVRADKTLTTAMKSTGEVMAIGRSYEEALLKAVRSLDIDKDFGYKGKYATWTDEELRD
LLVNPTDDRLFAIYEALKRGTSPEEISDITGIGPYFIYRIVNIVRMEEEIRRAKGTNENS
VMDADTLRRAKRTGFTDEQIGSMVGRSREEIADLRRSLKIIPTFKMVDTCAAEFEATTPY
YYSSYDTQCELVPSGRKKVLILGSGPIRIGQGIEFDYCTVHAVMALREQGIEAHIINNNP
ETVSTDYDTSDKLFFEPVTLEDVMNIIEKEEPHGLMVQFGGQTAINLALPLEKEIARLGL
KTKILGTSPDSIDLAEDRERFNALMTRLNIPQPNAGIAFSPAEAREVAAKIGYPVLVRPS
YVLGGRAMEIVYDEKGLDVYMQEAVRVSREHPVLIDDFLQDAVEIDVDAVCDGKDVLIGA
IMEHIEEAGIHSGDSACMIPPQTLPGVVLEVVRDYVRKIALGLGVIGIVNLQMAYKDGTV
YVLEANPRSSRTIPFVSKATGLPLAKIAANVMIGKSLAEQGYTREPKVPYVAVKEVLLPF
DKLPGADALLGPEMRSTGEVMGIDYQLGLAFFKAELSAYNPLPLGGVVFISVKDEDKAAA
AVAARKLVDAGLDIIATDNTAEYLSKSGIKVERVQKIYNGSPNVLDYMKRGEVKLIINTP
TTKQSVKDGYQIRRSAVDYHVPYITTIQAAQAAADAILLAGKDQVTIKALDEYHREVYYT
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagagcggatatacataaggtccttctcataggctcggggcccattcagatc
ggccaggcggcggagtttgatttctccgggtctcaggcctgcaagtccctgcgcgaggag
gggattgaagtggtcctggtcaactccaatccggccaccatcatgaccgatccggacacc
gcggacaaggtctatatcgagcctctggagccggatatcgtcgccaagatcattgagaag
gagaggccggatggaatcatcgccggcatcggcggccagaccgggctgaacatcacctcc
gagctggcagagatgggaattctagagaagtacaatgtggaggtgcttgggacctcagtc
aaatccattcaggaggctgaggaccgggacctgttcaagcaggccatgcagaaggtgggc
gagccggtgccagagagccgggcggtcaacactttggatgaggctctggaggttatggag
gagcttggtctgcccctggtggtcaggcccgcatatacattgggcggttcgggaggaggc
atagccaagacccgggaggagctcttgcagatctgcgacctggggctgaaaaggtccagg
atcagccaggtgctcctcgaagagagcgtggggggctggacggagctggagtatgaggtg
atgagggacagcaatgatacctgcatcaccatctgcaatatggagaacatggaccccatg
gggattcacaccggcgagtcgatagtggtgacccccatccagaccctcaccgaccatgag
attcagatgctcaggagcgcggccatcaatatcatccgggctctgaagatcgaggggggc
tgcaacatccagttcgcggtcaaggatggcgagtaccgggtgatcgaggtcaacccccgt
gtatcccgctccagcgccctggcctccaaagccaccggctatcctattgcccgggtgacg
gccaagatcgccattggcatgacactggatgagatcagaaacgatgtaacccgggagacg
ccggcatcctttgagccgatggtggattatgtggtggctaagatcccccgctggccgttt
gacaagttcgtccgggcggacaagacccttaccaccgccatgaagtccaccggcgaggtg
atggccatcggcaggagctatgaggaggcgctcttgaaggccgtacggtctttggatatc
gacaaggatttcggatacaagggaaagtatgccacctggacggacgaggagctgcgggat
ctgctagtgaatcccacagacgaccgactgtttgccatctatgaggctctgaagaggggg
acgagtcccgaggagatatcggatatcaccggcattgggccctacttcatctaccggatt
gtaaatatcgtccggatggaggaggagataaggcgggctaagggaacaaacgaaaattcc
gttatggatgcggataccctgcgtcgggcgaagaggacgggctttaccgatgagcagatc
ggatcgatggtgggacgaagccgggaggagatagctgacctgcgccgctccctgaagatc
attcccaccttcaagatggtggatacctgcgctgcggagttcgaggccaccactccatat
tactactcctcctatgacacccagtgcgagcttgtgccctccggccggaagaaggtcctc
atcctgggctcgggccctatccggatcggccaggggatagagttcgactactgcaccgtt
catgcggtcatggccctgcgagagcaagggatagaggcccatattatcaataacaatcca
gagaccgtctccaccgattatgatacctcggacaagctgttcttcgagccggtcaccctg
gaggatgtgatgaacatcattgagaaagaggagccccacggcctgatggtgcagttcggc
ggccagacggccatcaacctggctctccctctggaaaaggagatcgctcgcctggggctg
aagacgaaaattttaggcacctcgcccgacagcatcgacctggctgaggaccgggagagg
ttcaatgccctcatgaccaggctgaacatcccccagcccaatgcgggcatcgccttctca
ccggctgaggcgcgggaggtggcggcaaagataggctatcctgtcctggtccggcccagc
tacgttttagggggcagggcgatggagatcgtctatgatgagaagggactggacgtgtac
atgcaggaggcggtgcgggtctcgagggagcatccggtcttgatcgacgacttcctgcag
gatgcggtggagatagatgtggatgccgtctgcgacggaaaggatgtgctcatcggcgcc
atcatggagcatatcgaggaggcgggcatccactcaggcgacagcgcctgcatgataccg
ccccagacattgcccggcgtcgtcttagaggtggtgcgggattatgtgcgcaagattgcc
ctgggcctgggtgtgatcggtatcgtcaacctgcagatggcttacaaggacggcacagtt
tatgtcctggaggccaacccccgatccagccggaccatacccttcgtctccaaggccacc
ggcctgcccctggccaagatcgcggccaatgtgatgatcggcaaatcattggccgagcag
gggtacaccagggagcctaaggtgccctatgtggcggtaaaggaggttctcctgcccttc
gataagctgcccggggcggatgccctcctgggcccggagatgaggtccacgggagaggtg
atgggcattgactaccagctgggcctggccttcttcaaggcggagctgtccgcctacaat
cccctgcccctggggggagtggtcttcatatcggtcaaagacgaggacaaggcggcagcg
gctgtggcggcgaggaagctcgtcgatgcaggcctggatatcatcgccacggacaatacc
gcagagtatctctcaaaatcgggaataaaggtggagagggtgcagaagatctataacggc
agccccaatgtgctggactatatgaagcggggggaggtgaagctgataatcaacactccc
accaccaagcagtcggtgaaagacggctatcagatccggaggagtgcggtggactatcat
gtgccctatatcaccaccatccaggcggcgcaggcggcggccgatgccattctcctcgcc
gggaaggatcaggtcaccatcaaggccctggatgagtatcatcgggaggtctattacacc
tga
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