Methanothrix soehngenii: MCON_1032
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Entry
MCON_1032 CDS
T01468
Name
(GenBank) Cna B domain protein
KO
K20276
large repetitive protein
Organism
mcj
Methanothrix soehngenii
Pathway
mcj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MCON_1032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
SpaA
Big_7
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Dioxygenase_C
fn3_3
Motif
Other DBs
NCBI-ProteinID:
AEB67781
UniProt:
F4BZ82
LinkDB
All DBs
Position
complement(883813..893007)
Genome browser
AA seq
3064 aa
AA seq
DB search
MEGSGIGEESEDMRKRDKDSEYTVNVKLKKVLNHRYKKQFLVLAMILSVSVLLSAFAYAQ
EQPGGFPEGIGFPEQVDSAFSDIANQPPSIRSVEPDKPSPQPMGTAIKWTVRAEDPENDP
ISYMFQLKDSATWVPLTQWIDENTWTWNTAALEPGNYQIRVLVRDPMHTSGDFKLDERII
DYQITAPQVPAEVSAPAAVPELEQAPVIEQPIVQAPEQIAAPVNQPPQVLSLNADLASPQ
IAGAAVTFIAAASDPENDPLEFMFLVDGQARTDFINNPSWTWMTTEQDIGSHSIEVRARD
NNHNPQGDSSQATQFAIEPVPNNPPQMVDLSADQPSPQIAGAAVTFTAAASDPENDPLEF
MFLVDGQARTDFINNPSWTWTTTEQDIGSHTIEARTRDNNHNPQGDSSQATQFAIEPVPN
NPPQMVDLSADQPSPQIAGAAVTFTAAASDPENDPLEFMFLVDGQARTDFINNPSWTWTT
TEQDIGSHSIEVRARDNNHNPEGDSSRTMDFVVEAVPNNPPELVDLVADLASPQIAGAAV
TFTAAASDPENDPLEFMFLVDGQARTDFINNPSWTWTTTEQDIGSHSIEVRARDNNHNPE
GDSSRTMDFVVEAVPNNPPELVDLVADLASPQIAGTAVTFTAAASDPENDPLEFMFLLDG
VAQTEFISSPSWTWTTTTESIGSHIIEVRARDNNHNPEGDSSKTAEFVVEAVPNNPPEVV
DLASDLASPQIAGAAVTFTAAASDPENDPLEFMFLLDGVAQTEFISSPSWTWTTTTESIG
SHIIEVRARDNNHNPEGDSSKTAEFVVEAVPNNPPEVVDLASDLASPQIAGAAVTFTADA
SDPENDPLEFMFLLDGVAQTEFISSPSWTWTTTTESIGSHIIEVRARDNNHNPEGDSSKT
AEFVVEAVPNNPPEVVDLASDLASPQIAGAAVTFTAAASDPENDPLEFMFLLDGVAQTEF
ISSPSWTWTTTTESIGSHIIEVRARDNNHNPEGDSSKTAEFVVEAVPNNPPEVVDLASDL
ASPQIAGAAVTFTAAASDPENDTLEFMFLLDDVAQTEFTSIPSWTWTTTEQDIGSHTIEV
RARDNNHNPEGDSSQTAEFVVEAVPNNPPEVFDLASDLASPQIAGAAVTFTAAASDPEND
PLEFMFLVDGQARTDFINNPSWTWTTTEQDIGSHTIEVRARDNNHNPEGDSSQTAEFVVE
AAPNNPPEVFDLASDLASPQIAGTAVTFTAAASDPENDTLEFMFLLDDVAQTEFTSSPSW
TWTTTEQEIGSHTIEVRARDNNHNPEGDSSRTAEFVVEAAPNNPPELMDLAADLASPQLL
GSRINWTATASDAENDTISYRFLVNDTPVTDWQPENLFPWTATEAGTALITVQVKDDQHD
EPAAETGSISTEFVITAPEPAAEEAEEEILPVELNESPSIISLAPDLESPQVLGSSVNWT
ATASDAENDTISYRFLVNDTPVTDWQSENLFAWTATGAGTALVTVQVKDDQHDGPEGESG
NRSSEFAITMPLAEEAVEEVAEAEPVEEAAAEPNESPSITELSADLGSPQVLGSSVNWTA
VASDPEDDPISYRFLVNETAVTDWQAENKFIWTASEAGSFLITAQARDDQHEGPEGESGN
RSSEFVIMPLDEEAPFAEEPAEEIAPAETNVTDQVNVTAPANITDEENATAQANMTAEAE
NVTEVVEIPEDTLAPPVTENITTPIAPENITENLTEEVSEEDAEVVAPVVENQTPVLNSL
IPDIISPQKPGVTVTWTANATDVDMDPLLFRFFLNGPATNGAWEPKTEWISDDTWAWVTS
SIDRGENQVKVQVRDGQHSGEDGFDSEYSGYFTLAEPKMNISGLVYEDKNGNGVSDSGEA
LSGWTVQITKPDQSQVSVLTREDGTYSFQDLDAGSYTISETLPSGWVAAIPEGGSHNVDL
SEGDVEGLDFVNKLVQYTISGRKFNDLNGNGAFDGEPGMEGWTIELSRDGSLISTATTEK
DGSYKFAELSPGSYTVSEVEQAGWTRTAPPEGSYTVELTDGDVADINFGNHGSFAISGTS
FLDSNGNGVKDEGEPGRAGVAIQLSRDGSVINATTTLEDGSYAFRNLSPGTYSISQVAAE
GINQIAPEGPWTVELKDADVADKDFANSGGLSISGQKYYDINGNGLQDEDEPGIPGGEVS
LVENGKVVANTTTDENGLYSFENVLPGTYTINDPVPTGMVLTTSSTVTVTIKTVVVTNVN
FGIRGSNSISGMKYEDLNSDSTKNPGEKGLSGWEMVLTGSTWFGKPLPTLTATTDNNGNY
KFERLLPGTYKVSETSRTGWTQTAPAGGSHSIVFDVRTPPREAKDNDFGNRLAAQSISGV
KYNDINGNGVRDPGEPGMGGWKINLEPAGGGVIKVATTEADGSYSFTDVASGTYTVREIH
QPGWDQKAPASGTYTVTLDSSTTSVSGKDFGNWNPLPANPSLIPDKSSPQRSGTPIIWTA
RADDLDPLQYRFLVRGPGINLDTGYSSRSVWTWNTLGYPAGKYEVEVWIRDGQHSGPGGY
DVKKTVSFSLTGGNLPPSVQVLYTDRPEPQYAGSWIKWTAIASDPDRDPLQYRFFLRGPA
TRGFWVDMTGWGKSNQWIWRTTPADVGYSEVLVAVRDGKHAGPAGSDDYQVGRFFIMNVN
LPPVITGLGTNLPSAQPVGATIRWAATASDPEGNPLFFRYWMRGPSTGGLWRMVRDWSTD
PTWTWPTTPADAGTSEIKVQVRDGLHSSPAGWDDDAGALFTVRRQNLPPTLISLGSDKPS
SQKAGTPVTWTAIATDPDMEPLLYRFWLKGPSTGNSWKIVQDWSYKNQWTWASLPSDGGA
YTVYVYVRDGWHNPETGYDSAVGAPFILAPNQPPVLTALKSDRLSPQGAGTPVKWTAAAI
DADKDPIYYRFWLKGPSTGNVWQIAQDWSLANQWTWSSMPNDGGAYTVYVYARDGWHYPD
TGYDSALGSSYQLISNQPPVLTALKSDRPSPQGAGTPVKWTATASDADKDPLYYQFWLKG
PSTGNVWRIVQSWSAKNQWTWSSAPTDAGNYRVYVYVRDGKHAPANAYDSAMGQGYMLQD
MVRR
NT seq
9195 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggaagtgggataggagaggagagtgaggatatgcgtaaaagggataaggatagt
gagtatacagttaatgttaaattaaaaaaagtgctgaatcatagatacaagaagcaattt
cttgttcttgctatgatcctgtctgtgagcgtgctcttgagtgcgttcgcttatgcgcag
gaacagcctgggggatttcccgaggggataggtttccctgagcaggttgattctgcattt
tcagatattgcaaatcaaccgccatcgatcagaagcgtcgagccagacaagcccagcccc
cagcctatgggcaccgctataaaatggacggttcgggcggaggaccctgagaacgatcca
atatcgtatatgttccagctaaaggattctgctacatgggtcccattgacgcaatggata
gatgagaacacctggacatggaacacggctgcattggagccgggaaactaccagatcaga
gtcttagtgagagatccaatgcataccagtggggacttcaagctcgatgagaggataata
gactatcaaataacagctccccaggtcccggcagaggtcagtgcgcctgcagccgttccc
gaattggaacaggctcctgtgattgaacagccgatagtgcaggcccctgagcagatagca
gcgccggtaaatcagcctcctcaagtgctgagccttaatgccgatctagccagtccccag
attgctggtgcagcggtgaccttcatcgcggcagcatccgatccggagaacgatccattg
gagttcatgttcctggttgacggccaggctcgcacggatttcattaataatcccagctgg
acctggatgacaaccgagcaggatatcggctcccattccatcgaggttcgggcccgggac
aacaaccacaatccacagggtgacagctctcaggcgactcagtttgccattgagccggtg
ccaaacaatccaccccagatggtcgatctctctgccgatcagcccagcccccaaatagct
ggcgcagcagtgacattcactgcagcggcatccgatccagagaacgatccattggagttc
atgttcctggttgatggccaggctcgcacggatttcattaataatcccagctggacctgg
acgacaaccgagcaggatattggctcccataccatcgaggcacggaccagagataacaac
cacaatccacagggtgacagctctcaggcgactcagtttgccattgagccggtgccaaac
aatccaccccagatggtcgatctctctgccgatcagcccagcccccaaatagctggcgca
gcagtgacattcactgcagcggcatccgatccagagaacgatccattggagttcatgttc
ctggttgatggccaggctcgcacggatttcattaataatcccagctggacctggacgaca
accgagcaggatatcggctcccattccatcgaggttcgggcccgggacaacaaccacaac
cctgagggcgacagctcaaggacgatggattttgtcgttgaagcagttcccaacaacccg
ccagagttagtggatctggttgccgatctagccagcccccaaatagctggcgcagcagtg
acattcactgcagcggcatccgatccagagaacgatccattggagttcatgttcctggtt
gacggccaggctcgcacggatttcattaataatcccagctggacctggacgacaaccgag
caggatatcggctcccattccatcgaggttcgggcccgggacaacaaccacaaccctgag
ggcgacagctcaaggacgatggattttgtcgttgaagcagttcccaacaacccgccagag
ttagtggatctggttgccgatctagccagcccccagatagccgggacagcagtgacattc
accgcagccgcatccgatccggagaacgatccattggagttcatgttccttttggacggc
gtggctcagaccgagttcatctccagcccgagctggacctggacaaccaccactgagagc
attggatcgcacattatagaggttcgagcgagagacaacaaccacaatccagaaggagat
agctccaagacagcggagtttgtcgttgaagcagttcccaacaatccaccagaggtagtt
gatctggcttcagatctggccagcccccaaattgctggcgcagcagtgaccttcactgca
gccgcatctgatcctgagaacgatccattggagttcatgttccttttggacggcgtggct
cagaccgagttcatctccagcccgagctggacctggacaaccaccactgagagcattgga
tcgcacattatagaggttcgagcgagagacaacaaccacaatccagaaggagatagctcc
aagacagcggagtttgtcgttgaagcagttcccaacaatccaccagaggtagttgatctg
gcttcagatctggccagtccccaaattgctggcgcagcagtgaccttcactgcagacgca
tctgatcctgagaacgatccattggagttcatgttccttttggacggcgtggctcagacc
gagttcatctccagcccgagctggacctggacaaccaccactgagagcattggatcgcac
attatagaggttcgagcgagagacaacaaccacaatccagaaggagatagctccaagaca
gcggagtttgtcgttgaagcagttcccaacaacccgcctgaggtagttgatctggcttca
gatctggccagtccccaaattgctggcgcagcagtgacattcactgcggcggcatccgat
ccagagaacgatccattggagttcatgttcctcttggatggcgtggctcagaccgagttc
atctccagcccgagctggacttggacaaccaccactgagagcattggatcgcacattata
gaggttcgagcgagagataacaaccacaatccagaaggagatagctccaagacagcggag
tttgtcgttgaagcagttcccaacaatccaccagaggtagttgatctggcttcagatcta
gccagcccccaaattgctggcgcagcagtgaccttcactgcggccgcatccgatccggaa
aatgatacattggagttcatgttcctcttggatgacgtggctcagactgagttcacctcc
atcccgagctggacctggacaacaaccgagcaggatattggctcccataccatcgaggtc
agggctcgggacaacaaccacaatccagaaggagatagctcccagacagcggaattcgtg
gttgaggcggttcccaacaatccgcctgaggtatttgatctggcttcagatctagccagc
ccccagatagccggagcagcagtaacattcactgcggcagcatccgatcccgagaacgat
ccattggagttcatgttcctggttgatggccaggctcgcacggatttcattaataatccc
agctggacctggacgacaaccgagcaggatatcggctcccataccatcgaggttcgggcg
agagacaacaaccacaatccggaaggagatagctcccagacagcggaattcgtggttgag
gctgctccaaacaatccgcctgaggtatttgatctggcttcagatctagccagcccccag
atagccgggacagcagtaacattcactgcggcggcatccgatccggaaaatgatacattg
gagttcatgttcctcttggatgacgtggctcagactgagttcacctccagcccgagctgg
acctggacgacaaccgagcaggagatcggctcccataccatcgaggtcagggctcgggac
aacaaccacaatccggaaggagatagctccaggacagcggaattcgtggttgaggctgct
ccaaacaatccgccagagctaatggatctggccgctgatctggcaagcccacagcttctg
ggaagcaggatcaattggacagcaacggccagcgatgcggaaaatgataccatatcctac
cgcttcctggtcaacgataccccagtcaccgactggcaacccgagaatctgttcccctgg
acggcaacagaggccggaacggcattgatcaccgtgcaggtcaaagacgatcagcacgat
gagcctgcagctgaaaccggaagcataagcaccgaatttgtcataaccgctcctgagcca
gcagctgaggaggcagaagaggagatcctgcccgtcgagctcaatgagtctccgagcatt
ataagcctggctccagatttggagagcccccaggtcctgggaagcagtgtcaactggacg
gcaacggccagcgatgcggaaaatgataccatatcctaccgcttcctggtcaacgatact
ccagtcaccgactggcagtctgagaatctgttcgcctggacggcaacaggggccggaacg
gcattggtcaccgtgcaggtcaaagacgatcagcacgatggacccgaaggcgagagcgga
aacagaagctctgagttcgccataacaatgcctctggcagaagaagctgttgaggaggtc
gcagaagcagaaccggtcgaagaggccgctgctgagccgaatgaatcaccaagcatcaca
gagctttcagccgatctgggaagcccccaggttctgggaagcagtgtcaactggacagca
gttgccagcgatccggaagatgatcccatatcttatcgcttcctggtcaacgagactgca
gtcaccgactggcaggcagaaaacaagttcatctggactgcatctgaggccggatcattc
ctgatcacagcccaggccagggacgatcagcatgaggggccggagggcgagagcggaaat
agaagctccgagttcgtcataatgccgctcgatgaagaagctccctttgcagaggaacct
gcggaggagatcgctccagctgagacaaatgtcactgaccaggtcaatgtgacagctccc
gccaatatcacagatgaagagaatgccaccgctcaggccaatatgaccgctgaggcggag
aatgtgactgaagtggtggagatcccagaggatactctggcccctccagtgactgagaac
atcaccactcccattgcaccggagaacatcaccgagaacctgaccgaagaggtatctgaa
gaggatgcagaggtcgtagctcctgttgtggagaatcagacccctgtgctgaactctctg
attccggatatcataagcccccagaagccaggggtgactgtaacctggaccgccaatgcc
actgacgtggacatggatccgttgctcttccggttcttcctcaatggaccggcaacaaat
ggagcctgggagccaaagacagaatggatttcagatgatacctgggcctgggtgacatcc
tcaatagatcggggagagaatcaggttaaagttcaggttagagatggacagcactctggc
gaagacggctttgactccgagtactccggctacttcaccctcgccgagccgaagatgaac
atctcgggcctggtatatgaggacaagaacggaaatggcgtgtctgacagcggcgaggcc
ttatccggctggacggtacagataaccaaaccggatcaaagccaggttagcgtcttaacc
cgagaggatggaacctatagtttccaggatcttgatgctggaagctacaccatcagcgag
actctgccatctggctgggtagcagcaattcccgaaggcggatctcataacgtcgatctc
tccgaaggagacgttgaaggcctggacttcgtcaacaagctcgtccagtacaccatctcc
ggcaggaagttcaacgacctgaacggcaacggtgccttcgacggcgagccgggaatggag
ggctggacgattgagctctctagagacggcagtttgatcagcactgccaccacggaaaag
gacggatcctataagttcgcagagctatcccccggaagctacaccgtatccgaggtcgag
caggctggctggaccaggactgcacctcctgaaggctcctacaccgtggagctgacggat
ggggatgtagcagacataaacttcggcaaccacggctcctttgccatatcaggaaccagc
ttcctggacagcaacggcaacggcgtcaaggatgagggcgagccgggcagggctggagtg
gccattcagctatcccgcgacggtagcgtcataaatgccaccaccacgcttgaagatggc
tcttatgccttccgcaatctgtctcctggaacctacagcataagccaggtcgctgcagag
ggcatcaatcagatagcacctgaaggcccctggacggttgagcttaaggatgccgatgtg
gccgacaaggatttcgccaacagcggcggtctttccatctccggccagaagtactatgac
atcaacggcaacggcctgcaggacgaggatgagcctggcattcccggcggggaagtgagc
ctggtcgagaacggcaaggtagtggccaataccaccaccgatgagaacggactctacagc
ttcgagaacgtcctgcctgggacctacaccataaacgatcccgtcccgacgggcatggtc
ctcaccacctcttccacggtcacagtgaccatcaaaacggtagtggtgaccaacgtcaac
ttcggaatacgcggatctaattccatatccggaatgaagtacgaggatctgaatagcgac
agcaccaagaatcccggtgagaagggcctttccggctgggagatggtcctgaccgggagc
acctggtttggcaagccgcttcccacccttaccgccaccacggacaacaacggcaactac
aagttcgagaggctccttcccggcacatacaaggttagcgagacctcaagaaccggctgg
acgcagaccgctccagcgggggggagccacagcatagtcttcgatgtgagaacacctccc
agagaggcaaaggacaacgactttgggaatagattggcagctcaatccatctctggagtg
aagtacaacgatatcaacggcaacggggtcagagatcccggcgagccaggaatgggcggc
tggaagatcaacctggagccggctggaggaggggtgataaaggttgcaaccaccgaagct
gacggctcttacagtttcacggatgttgcctctggaacctataccgttcgggagattcat
cagcccggatgggatcagaaggcaccagcgagtggcacttataccgtcaccctggattca
tccactaccagcgtttctggaaaggatttcggcaactggaatccattgcctgccaatcca
tcacttatcccggacaagagcagtccccagaggtctggaacaccgatcatctggacggcc
agggcagatgaccttgatcctctccagtacagattcctggttagagggccgggaatcaac
ctggacaccggctatagcagcaggagcgtctggacctggaacactctcggctatcctgcc
ggtaagtatgaggttgaggtctggataagggatggacagcattccggcccaggaggatac
gatgtcaagaagaccgtctcctttagcctgaccggcggcaatctgccgcccagtgtgcag
gtcctttacaccgaccggcctgagccgcagtatgccggcagctggatcaagtggacggct
atagcctctgatccagacagagaccccttgcagtaccggttcttcctgcgcggtcctgcc
acccgcggattctgggtggatatgaccggctggggcaagagcaaccagtggatctggagg
accactcctgcagacgtgggctacagcgaggtgctggtagcagtcagggacggcaagcat
gccggacctgccggctcggatgactatcaggttggccggttcttcatcatgaatgtgaac
ctgcctccggtgatcaccggcctgggcacgaacctgcccagcgcacagccagtaggagct
accatcagatgggcggccaccgccagcgacccggagggcaatccgctcttcttcaggtac
tggatgaggggtccatcgaccggcggactgtggcgaatggtccgcgactggtccaccgat
ccaacctggacctggccgacaacgccggctgatgcgggcaccagcgagatcaaggtgcag
gtgagggatggcctccattccagcccagccggatgggacgatgatgctggtgcgctgttc
acagtgcggcggcagaatctgccccccactctgatctcccttggatcggacaaacccagc
tcccagaaggcaggaacgcctgtgacctggacagcaatagcgactgacccggatatggag
ccactgctttaccggttctggctgaagggtccatccaccgggaacagctggaagatagtg
caggactggtcatataagaatcagtggacctgggccagcctgccgtccgatggcggagcc
tatacggtctatgtctatgtccgggatggctggcataatcctgagaccggatatgatagc
gctgtgggggcccccttcatcctggcccccaatcagccgccggttctgaccgctctgaaa
tccgaccgcctcagccctcaaggagctggaaccccggttaagtggaccgctgcggcaatc
gatgcagataaagatccgatatactaccggttctggttgaaaggcccctccaccggcaac
gtctggcagatagctcaagactggtccctggcgaaccagtggacctggtccagcatgcca
aatgatggcggagcctatacggtctacgtctacgccagagacggctggcattaccctgac
accgggtacgatagcgctctgggctcctcctatcagctgatctccaatcagccgccggtt
ctgaccgctctgaaatccgaccgccccagcccccagggagctggaactccggttaagtgg
acggcaaccgctagcgatgcagataaagatccactgtactatcagttctggctgaaaggc
ccctccaccggcaatgtttggaggatcgtgcagagctggtcagctaagaatcagtggacc
tggtccagtgctcccaccgatgctggcaactatagggtctatgtgtatgtcagagacggc
aagcatgccccagccaatgcttatgacagtgccatgggccagggctatatgctgcaggat
atggtgagacggtag
DBGET
integrated database retrieval system
