Methanothrix soehngenii: MCON_1409
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Entry
MCON_1409 CDS
T01468
Symbol
rfcS
Name
(GenBank) replication factor C small subunit
KO
K04801
replication factor C small subunit
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCON_1409 (rfcS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcj03032
]
MCON_1409 (rfcS)
DNA replication proteins [BR:
mcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
MCON_1409 (rfcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RuvB_N
Rad17
AAA_14
AAA_16
Mg_chelatase
RCF1-5-like_lid
AAA_assoc_2
ResIII
AAA_3
nSTAND3
UBA_Rad5
TIP49
IstB_IS21
AAA_7
MCM
AAA_2
AAA_24
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEB68078
UniProt:
F4BSW8
LinkDB
All DBs
Position
complement(1211106..1212077)
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AA seq
323 aa
AA seq
DB search
MYIKEEIWIEKYRPERLDDIVGQDEIVRRLKSYVKTRNLPHLLFSGPPGVGKTAASISIV
KEIFGETWRNNFIELNASDERGIDIIRHKVKDFARMAPLGEADFKVIFLDEADALTNDAQ
SALRRTMERYSATTRFILSCNYSSKIIEPIQSRCAVYRFKPLSPEAVTKRIKFIASEEGL
RVSDGGLSAIEYVAGGDMRKAINALQAAALLGDEVDEETIYQITSTAKPEEIKSFIKTAI
SGDFVGARAILDDLLLSKGLSGQDVVIQIHRAMLDLDDIADRDRVKLIDRIGEIDFRMTE
GANERIQLEALLAYFALMASEQR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttgtatatcaaagaggagatctggatagagaagtaccggccggagaggctggacgatatt
gtgggccaggacgagattgtccgccgtctgaagtcctatgtgaagacgcgaaacctgccc
catcttctattctccgggccgccaggggtgggcaagaccgctgcatccatctccattgtc
aaagagatcttcggcgagacctggaggaacaacttcatcgaattgaatgccagcgatgag
cggggcatagatatcatccgccacaaagtcaaggacttcgcccggatggcgcccctggga
gaggcggatttcaaggttatatttctggatgaggccgatgccctgaccaacgatgcccag
agcgctctgcgccggactatggagagatactccgctaccaccaggttcatactctcctgc
aactactcctccaagatcatcgagcccattcagtcccgctgtgcggtttaccgcttcaag
cccctctctcctgaagcggtgaccaagaggatcaagttcattgccagtgaggagggactg
cgggtttcagatggaggtctgtccgctatagagtatgtcgccggcggagacatgagaaag
gcaatcaacgccctgcaggcggcagctctcttgggcgacgaggtggacgaggagacgatc
taccagatcacatccaccgccaaaccggaggagatcaagagcttcatcaagaccgcaata
tctggagattttgtgggagcgcgcgcaatactggatgatctcctgctatccaaagggctc
tccggccaggatgtggtgatccaaatccaccgggctatgctggacctggatgatatcgca
gacagggatcgggtaaagctcatcgaccgtatcggagagatcgattttcgcatgactgaa
ggagcaaacgagagaattcagctcgaggctctcctggcctacttcgccctgatggcttca
gagcagagatga
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