Methanothrix soehngenii: MCON_1488
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Entry
MCON_1488 CDS
T01468
Symbol
rfcL
Name
(GenBank) replication factor C large subunit
KO
K04800
replication factor C large subunit
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCON_1488 (rfcL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcj03032
]
MCON_1488 (rfcL)
DNA replication proteins [BR:
mcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
MCON_1488 (rfcL)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
AAA_22
AAA_16
Rad17
AAA_25
AAA_28
AAA_assoc_2
PhoH
AAA_30
RuvB_N
DNAX_ATPase_lid
AAA_5
AAA_14
Phage-MuB_C
AAA_6
Cytidylate_kin
nSTAND3
TIP49
AAA_24
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AEB68141
UniProt:
F4BTD6
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Position
complement(1280012..1281616)
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AA seq
534 aa
AA seq
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MPAPLKWTEKYRPATLKQVLGNGKAIDDLREWALSWERSEPITGAVILYGPAGTGKTSAA
LALAHDFDWDYIEMNASDARTAGMIEKIAVPASRSQTFSGKPRLVILDEADNLHGTADRG
GAAAMLRLVRNTLQPVILIANEYYEIDKSLRDATRGIQFRSVRSTTIAQALRAICQAEGI
DCNPDLLVTIAERAGGDMRSGINDLQAAAEGQETLREEDLATAQRDVKSSIFRVLEVIYK
GNNAKEALEASYNLDESPEDLINWVDENLPLAYSGQDLLRGFETLARSDIFLGRVRRRQN
YGLWRYASYLMTGGVQAAKKERRHGYVAFRPPSLWRRMGQTRKVRSIRDSAARKIGRHCH
VSLAFARSELMDFVGMLLKDKKGAPQLAARLDLTAEEIALLMGSSPGTKKVQNIFEEAMR
IQSREQIEEIELAWRKSSQPTLNKRSDGLLQTLSVEGLPDDETRHPARAPAGQDSQSAAP
SVHRPETGLNGPEAKEPGRRGRPRKTEGEANEGKKDIKESTFKSGKRQKSLFDF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacctttaaagtggacggagaagtatcgtccagccaccctcaagcaggttctt
ggcaatggcaaggcgatagacgacctgcgggagtgggctctctcctgggagagaagcgag
cccatcaccggcgcggtcattctatacggcccggcgggaacgggaaagacttcggcggct
ttagccctggcacatgatttcgattgggattacattgagatgaatgcctcagatgctcgc
accgcaggcatgatcgagaagattgccgttccagcatcgcgaagtcagacgttctccgga
aaaccgaggctggttattttagatgaagcagacaacctccatggcactgccgaccgaggc
ggagcagcggccatgctccgcctggtcaggaatactctccagccagtgatactgattgcc
aatgagtactatgagatcgataagtcactccgagatgcgacccggggaattcagttccgg
tcggtgcgctccaccaccatcgcccaggcattgagggcgatctgccaggctgagggcata
gactgcaatcccgatctgctggttacgatcgccgagagggcagggggagacatgcgctcc
gggatcaacgatctgcaggcagccgccgaaggccaggagacgctcagggaagaggatctg
gccactgcccagagggatgtcaaatcctccatcttccgggtgctggaggtgatctacaag
ggcaataacgccaaggaggccctggaagcgtcctataatctggacgagagcccggaggat
ctgatcaactgggtggatgagaacctgcccctggcatactccggccaggatctcctccgg
ggcttcgagaccctggctcgaagcgacatatttctgggcagggtacggcggaggcagaac
tacggcctgtggcgctatgccagctatctcatgaccggcggagtgcaggcggcaaagaag
gagcgcaggcatggttatgtggccttccgtccacccagcctgtggcgaaggatgggccag
acccgcaaagtcagatcgataagggactctgccgccagaaagatcggcaggcactgccat
gtatcgctcgccttcgcccgctcggagctgatggactttgtgggaatgctgctcaaagac
aagaaaggcgctccccaactggccgcccggttggatctgaccgcagaggagatcgctctg
ctcatgggaagctctcctggcacaaagaaggtgcagaacatcttcgaggaagcgatgaga
attcaaagcagagaacagatcgaggagatagagctggcatggcggaagagcagccaaccc
accctcaataagagatctgatggccttctccagacgctctctgtggagggcctgccagat
gatgagactcgtcaccctgcaagggcgccggcagggcaggacagccagtctgctgcccct
tccgttcaccgcccggaaacagggctgaatggaccggaggcgaaagagcctgggagaaga
ggcaggccaaggaagacagagggtgaggctaatgaaggcaaaaaggatatcaaggaatcc
accttcaagtcagggaaaaggcagaagtccctattcgacttttga
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