Methanothrix soehngenii: MCON_1578
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Entry
MCON_1578 CDS
T01468
Symbol
tfe
Name
(GenBank) TFIIE alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MCON_1578 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcj03021
]
MCON_1578 (tfe)
Transcription machinery [BR:
mcj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MCON_1578 (tfe)
Prokaryotic type
Archaeal type
TFE
MCON_1578 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
RepL
HTH_IclR
HTH_9
HTH_20
HTH_23
Rad50_zn_hook
Zn_Ribbon_TF
HTH_DeoR
HTH_11
HTH_Crp_2
HTH_36
GntR
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AEB68217
UniProt:
F4BU19
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All DBs
Position
1353964..1354461
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AA seq
165 aa
AA seq
DB search
MAVIEEVIHRAYLNKLVGEEGLRIVECIPEEEITDERLAELTGISLNTVRRTLYLLYEHR
LAIYRRKRDPDSGWLTYLWQLCPENFDKALQSEAKRLLRKLEERLAYEKENIFYACTEGC
ARFIFDEASDANFVCPFCQGSLEYMENAKVVEAIERQITDLKACV
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
ttggcggtcattgaggaagttatccacagggcttatttaaacaagcttgttggtgaagag
ggtcttagaattgtagaatgcattccagaagaggagataaccgatgagcgactggctgag
ctcactggaatcagcctgaacacagtaaggcgtactctctatctgctttatgagcacagg
cttgccatatacaggcggaagcgagatcccgattccggttggctcacatacctttggcag
ctctgtccggagaacttcgataaagccctgcagtcggaggccaaaaggctgttgcgaaag
ctggaagagaggctagcctatgagaaggagaacatcttttatgcctgcacggagggctgt
gccaggttcatattcgacgaagcaagcgatgccaacttcgtctgccccttctgtcagggt
agcctggagtatatggagaacgcaaaagtggtagaggccatagaaaggcagatcacggat
ttaaaggcctgcgtatga
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integrated database retrieval system