KEGG   Methanothrix soehngenii: MCON_1578
Entry
MCON_1578         CDS       T01468                                 
Symbol
tfe
Name
(GenBank) TFIIE alpha subunit
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mcj  Methanothrix soehngenii
Pathway
mcj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mcj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MCON_1578 (tfe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcj03021]
    MCON_1578 (tfe)
Transcription machinery [BR:mcj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MCON_1578 (tfe)
 Prokaryotic type
  Archaeal type
    TFE
     MCON_1578 (tfe)
SSDB
Motif
Pfam: TFIIE_alpha RepL HTH_IclR HTH_9 HTH_20 HTH_23 Rad50_zn_hook Zn_Ribbon_TF HTH_DeoR HTH_11 HTH_Crp_2 HTH_36 GntR Xre-like-HTH
Other DBs
NCBI-ProteinID: AEB68217
UniProt: F4BU19
LinkDB
Position
1353964..1354461
AA seq 165 aa
MAVIEEVIHRAYLNKLVGEEGLRIVECIPEEEITDERLAELTGISLNTVRRTLYLLYEHR
LAIYRRKRDPDSGWLTYLWQLCPENFDKALQSEAKRLLRKLEERLAYEKENIFYACTEGC
ARFIFDEASDANFVCPFCQGSLEYMENAKVVEAIERQITDLKACV
NT seq 498 nt   +upstreamnt  +downstreamnt
ttggcggtcattgaggaagttatccacagggcttatttaaacaagcttgttggtgaagag
ggtcttagaattgtagaatgcattccagaagaggagataaccgatgagcgactggctgag
ctcactggaatcagcctgaacacagtaaggcgtactctctatctgctttatgagcacagg
cttgccatatacaggcggaagcgagatcccgattccggttggctcacatacctttggcag
ctctgtccggagaacttcgataaagccctgcagtcggaggccaaaaggctgttgcgaaag
ctggaagagaggctagcctatgagaaggagaacatcttttatgcctgcacggagggctgt
gccaggttcatattcgacgaagcaagcgatgccaacttcgtctgccccttctgtcagggt
agcctggagtatatggagaacgcaaaagtggtagaggccatagaaaggcagatcacggat
ttaaaggcctgcgtatga

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