Methanothrix soehngenii: MCON_1693
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Entry
MCON_1693 CDS
T01468
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MCON_1693 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcj03021
]
MCON_1693 (tfb)
Transcription machinery [BR:
mcj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MCON_1693 (tfb)
Prokaryotic type
Archaeal type
TFB
MCON_1693 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_LysW
GpA_ATPase
Cas12f1-like_TNB
Trm112p
Ribosomal_S27e
HTH_AsnC-type
eIF-5_eIF-2B
RPA_interact_C
HTH_Tnp_ISL3
DUF5817
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AEB68313
UniProt:
F4BUS3
LinkDB
All DBs
Position
complement(1450915..1451928)
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AA seq
337 aa
AA seq
DB search
MEEIEKLREIERAEPEKLKERTRLRREKEKVDEFEKFTVECPECKSHTLVRDYERAELVC
SDCGLVIDENFIDQGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKT
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLSRNVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIAEVSRVSRKEIGRTYRFVSRELALK
LMPTSPIDYIPRFCSGLNLKGEVQAKGIEILRQAAEKELTSGRGPTGVAAAAIYIASILC
GDRRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaaattgaaaagctgagagagatagagagggcagagccggagaagctcaaggag
cgtacccggctcagacgcgagaaagagaaggtagacgagtttgagaagtttacagtcgag
tgcccagagtgcaagagccacaccctggtgcgcgactatgaacgagcagaactggtttgc
tccgactgcggcctggtgatcgatgagaacttcatagatcaggggccggaatggagagcc
ttcgaccacgatcaacgcatgaagaggtcgagggttggggcgcccatgacgtacaccatc
cacgacaagggactctccaccatgatcgactggaggaacagggactcatatggcaagacc
atatcctccaagaatagggctcagctctaccgcttgagaaaatggcagaggcgcatccgg
gtcagcaatgccacagagcgaaacctagcctttgccctgtctgagctggaccgaatggca
tcagctctaggtctatccagaaatgtgcgggagacggcggcggttgtctaccgcaaggct
gtagacaagaacctcatccgggggcggagcattgaaggcgtggcagcagcagcgctctat
gccgcctgccgccagtgcaatgtgcctcgtaccctggatgagatcgcagaggtatccagg
gtatcgagaaaagagatcggcaggacataccggtttgtgtcccgggagctggccttgaag
ctcatgcccaccagccccatcgactacatcccccgcttctgctccggcctgaatctgaag
ggcgaggtgcaggcgaagggaattgagatcctccgccaggccgcggaaaaggagctcacc
agcgggcgcgggcccactggcgtggccgcagccgctatatatatcgcctccatcctctgc
ggggaccggcgcacacagcgcgaggtggcagatgtggcaggagtgacagaggtcaccatc
aggaaccgctacaaagagctggcagaagagctggacatagagataatcctttga
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