Methanothrix soehngenii: MCON_1877
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Entry
MCON_1877 CDS
T01468
Symbol
apn
Name
(GenBank) Apurinic-apyrimidinic endonuclease
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCON_1877 (apn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcj03400
]
MCON_1877 (apn)
Enzymes [BR:
mcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MCON_1877 (apn)
DNA repair and recombination proteins [BR:
mcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MCON_1877 (apn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Dak1
Motif
Other DBs
NCBI-ProteinID:
AEB68463
UniProt:
F4BW33
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All DBs
Position
1609669..1610523
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AA seq
284 aa
AA seq
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MLRLGMHVSIAGGLEKASDRAREKGCDAFQIFTTNPRSWRSKPIAQQSIDLFSSWLKEYD
LHPVVSHMPYLPNLASPRDEVYSRSVQALTDELVRCRLLGIPYLVTHLGSNLGAEKKDGR
ERIAEALKKAIADSGGDVMVLLENGAGTKNSMGSTFKDIASIIESLPGQSRSLGVCLDTC
HLFAAGYDLRTPRALERTLEEFDCCISSNRLKLVHLNDCQGTLGSHLDRHEHIGLGQIGL
EGFRSIVCHPSLRELPMIMETPVDSRRDDKANLLVVRALASLIE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgactgggtatgcatgtctccattgccggcggcctggaaaaggcgtcggacaga
gcacgggagaagggctgcgatgcctttcagatcttcaccaccaatcctcgtagctggagg
tccaagcccattgctcaacaatccatagatctcttctcctcctggctcaaagagtatgat
ctgcaccccgtcgtatctcatatgccctaccttcctaacctcgcctcccctcgagatgag
gtctactcgaggtcggtgcaggctctgaccgatgagctggtgcgctgccgacttctgggc
ataccatatctggtgacccacctgggaagcaatctgggcgcagaaaagaaagatggaagg
gagaggatagctgaggccttgaagaaggccatcgctgattccgggggcgatgtgatggtg
ctcctggagaacggcgccgggacaaaaaatagcatgggaagcacctttaaggatattgcc
tccatcatcgagtcccttcccggccagtcccgcagccttggggtgtgcctggacacttgc
cacctttttgctgctggatacgatcttcgcaccccccgcgccctggagaggactttagag
gagttcgattgctgcataagctcaaatcggctcaagctggtacatctgaacgactgccag
ggcacccttggttcgcacctggaccgacatgagcacataggcctgggacagatcggcctg
gaaggcttccggtcaatcgtctgccacccctctctgcgagagctgccgatgataatggaa
acgccggtggactcgcgacgggacgataaagcaaaccttctagtggtcagagctcttgcg
tcactgatcgaatag
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