Methanothrix soehngenii: MCON_2842
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Entry
MCON_2842 CDS
T01468
Name
(GenBank) OB-fold nucleic acid binding domain protein
KO
K07466
replication factor A1
Organism
mcj
Methanothrix soehngenii
Pathway
mcj03030
DNA replication
mcj03420
Nucleotide excision repair
mcj03430
Mismatch repair
mcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCON_2842
03420 Nucleotide excision repair
MCON_2842
03430 Mismatch repair
MCON_2842
03440 Homologous recombination
MCON_2842
03460 Fanconi anemia pathway
MCON_2842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcj03000
]
MCON_2842
03032 DNA replication proteins [BR:
mcj03032
]
MCON_2842
03400 DNA repair and recombination proteins [BR:
mcj03400
]
MCON_2842
Transcription factors [BR:
mcj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MCON_2842
DNA replication proteins [BR:
mcj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MCON_2842
DNA repair and recombination proteins [BR:
mcj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MCON_2842
MMR (mismatch excision repair)
MCON_2842
DSBR (double strand breaks repair)
HR (homologous recombination)
MCON_2842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
AEB69217
UniProt:
F4C0F2
LinkDB
All DBs
Position
2415839..2416954
Genome browser
AA seq
371 aa
AA seq
DB search
MDSELEEIYRQVADSISPEEFEERVKEKVALMAGLCDSRTAAMLVARDLGSPDLLTKIGS
IRPEMGNVTFTGRVIAVSPVREFQRSDGSLGRVANITLADETGSVRVALWDETAELIKSG
DLAVDQCLKVRGLAKEGFAGTEVSLGRGGGFEEIDQDIHPRVAPYKIGELKRDMSDVNLL
AAVVDPGEMREFERRDGGKGQVRGVTLGDETGKVRLTLWDEQAQMPLLKGETLEIVGGSV
RERYGLLEIQTGGSTAIRKSTKKLDFSERMTPIAELKEGMLSSVSGFVSGLGEVREFQRD
DGRMGRVANIYISDDSGRIRAALWGEHVDRLVEVDLGYRAEIIDAQVKSGWNEGLELSCG
WRTRITFAPPE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggattcagagctggaggagatttaccgtcaggttgcagacagcatatcacctgaagaa
ttcgaggagagggtgaaagagaaggtggcccttatggccggcttatgcgactcccggacc
gcggccatgctggtggccagggacctgggcagccctgatcttctgaccaagatcgggagc
atccggcctgagatggggaacgtcacattcaccggcagggtgatcgccgtatctcctgtg
cgggagtttcagcgatcagacggatctcttggcagggtggcaaacatcaccctggcggac
gagaccgggtcggtgcgtgtcgccctctgggacgagacagcagagctaatcaagtcaggg
gacctcgctgtggaccagtgcctcaaggtgaggggactggccaaagagggatttgcgggg
actgaggtcagccttggccgcggtggcgggttcgaggagatagatcaggatattcatcca
cgcgtcgcgccttacaagattggagagctgaagagggacatgagcgatgtcaaccttctg
gcggcggttgtggatccgggagagatgagggagtttgagcgccgagatgggggcaagggc
caggttcgaggggtgacgctgggagatgagaccggcaaggtccggctcaccctctgggat
gagcaggcccagatgcctcttcttaagggggagacgcttgagatcgtcggcggctcagtc
cgggagaggtacggcctcttggagatccagaccggtgggagcaccgctattcgcaagagc
actaaaaagctggacttctcagagaggatgaccccaatagcggagctgaaagagggaatg
ctctctagcgtttccggctttgtatccggcctgggggaggtgcgggagtttcagagggat
gatggcagaatgggccgggtggcgaatatctacatctctgatgattccggccggatccgg
gcagctctatggggagagcatgtcgatcgactggtggaggttgatcttggatacagggcg
gagattatcgatgcgcaggtcaagagcggctggaatgagggattggaactctcctgcgga
tggcgcaccaggattactttcgccccgcctgagtaa
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integrated database retrieval system
