Methanothrix soehngenii: MCON_2891
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Entry
MCON_2891 CDS
T01468
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mcj
Methanothrix soehngenii
Pathway
mcj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MCON_2891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcj03019
]
MCON_2891
03009 Ribosome biogenesis [BR:
mcj03009
]
MCON_2891
04131 Membrane trafficking [BR:
mcj04131
]
MCON_2891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcj04147
]
MCON_2891
Messenger RNA biogenesis [BR:
mcj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MCON_2891
Ribosome biogenesis [BR:
mcj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MCON_2891
Membrane trafficking [BR:
mcj04131
]
SNARE
SNARE associated proteins
Others
MCON_2891
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MCON_2891
Exosome [BR:
mcj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MCON_2891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_14
TIP49
AAA_22
AAA_33
AAA_5
AAA_2
AAA_3
AAA_28
nSTAND3
AAA_18
Mg_chelatase
ABC_tran
AAA_7
Sigma54_activat
NPHP3_N
DUF5906
TsaE
AAA_17
DUF815
SLFN-g3_helicase
IstB_IS21
Viral_helicase1
Zeta_toxin
AAA_11
Zot
Ribosomal_L7Ae
Motif
Other DBs
NCBI-ProteinID:
AEB69255
UniProt:
F4C0R7
LinkDB
All DBs
Position
2458063..2460240
Genome browser
AA seq
725 aa
AA seq
DB search
MKPAEDASVLLRVAEAYHKDAGKGVARINPIILAQLGVENGGVVEINARDKVYAIAWPGT
PEDPQDIIRIDGNTRSNLGTGIDNRVNVRRATARPARKIVVAPTRQIRLMGGQQYLLRML
QGRAVVKGEMLRVEMINSSLNLAVVSTVPNGPVLVTQETIISITRETLDELALHVRDISY
EDIGGLSREIREIREMIEVPLRHPELFSRLGINPPRGVLLHGPPGTGKTLIARAVAGETD
ANFISISGPEIVSKFYGESEQRLRQIFDEASKAAPSIIFIDEIDSIAPKREEVSGDLERR
VVAQILSLMDGLSSRGEVIVIAATNRPNALDPAIRRGGRFDREIEIGIPNRNGRLEVLYV
HTRGMPLDESLDLMEIADSTHGFVGADLYALCKEAAMRTLERALPDLDVKEDIPLDVLDN
LNVTREDFLSALKKIEPSAMREVFVEVAQVHWDEVGGLDEAKRSLVEAVEWPLMYPEAFA
SVGVRPPRGILLYGLPGTGKTLLVRALATESNVNFISVKGPELLSKWVGESERAVREIFR
KARQAAPALVFFDEIDSIVPARGSGSDSHVTERVVSQFLTEMDGLMELKDVVIVAATNRP
DLLDSSLLRPGRFDRLVYIPMPDKEARQKILEIYLSKMPAYEVSAQWLADITENFSGADL
EMLCREAGMLALREHIRPGMKREELIVDKILVTEKRFQEASEYIRPHLSKDMLQGYTKMI
REFQV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgcagaggatgcatcagttttgcttcgagtggctgaagcatatcataaggat
gcggggaagggagtggccaggatcaatcccatcattctcgcccaattgggagtggagaac
ggcggggtagtggagatcaatgcccgggataaggtctatgccatcgcatggcctggaact
cctgaggacccccaggatataatcaggatcgacggaaacacccggtccaacctggggacg
ggaatagacaatcgggtgaatgtccgccgggccacggccaggcccgccagaaagatcgtg
gtcgcccccacccgccagatccgcctcatgggaggacagcagtatctcttgcgcatgctc
caggggagggcagtggttaagggtgagatgctgcgggtggagatgataaacagcagcctc
aacctggcagtggtgagcaccgtgccaaacgggccggttctggtaactcaggagacgatc
atcagcatcaccagagagaccctggatgagctggccctgcatgtgcgggacatatcctat
gaggacatcggcggcctgtcccgggagatcagggagatcagagagatgatcgaggttccg
ctgcgccatccagagctcttcagccggctgggaatcaatcctccccggggggtgctcctg
catggtcctccgggaacgggaaagacgctcatcgccagagcggtggcaggcgagaccgac
gccaacttcatctccatctccgggccggagatcgtatccaagttctatggcgagagcgag
cagcggctgcgccagatattcgatgaagcgtcgaaggcggctccttccatcatattcatc
gatgagatcgattccatcgctcccaagagggaagaggtctcgggcgacctggagcggcgg
gtggttgcccagatcctttccctgatggacggcctctcctccaggggagaggtgatagtg
atagcggccaccaaccggcccaatgccctcgatcctgccattcgcagggggggccgattc
gaccgggagattgagataggcataccaaacagaaacggcaggctggaggtgctctatgtc
cacaccaggggcatgcccttggatgaatcgctggacttgatggagatcgcagactcgact
catggcttcgtaggagcggacctttatgccctgtgcaaagaggcggccatgcgcaccctg
gaaagggctctgcccgacctggacgttaaagaggacataccattggatgtgctggacaat
ctcaatgtgaccagagaggatttcctgtccgccctgaagaagatcgagccatcggcgatg
agagaggtcttcgtcgaggtggcccaggtccattgggatgaagtgggcggcctggatgag
gccaagcggtccctggtcgaggcggtggaatggccgttgatgtacccagaggccttcgcc
tcggtgggtgtccggccgccgcggggtattctgctctacggtcttcccggtacgggcaag
accctcctggtcagagctctggccacggagagcaatgtcaacttcatcagcgttaaggga
cctgagctattgagcaaatgggtgggcgagtcggagagggcagtcagagagatctttcgc
aaagcccgccaggctgctcccgccctggtattcttcgacgagatcgattccattgttccc
gcccggggcagcggatcggactcgcatgttaccgaaagagtggtcagccagttcctgacg
gagatggatggactcatggagctgaaggatgtggtgatagtggcggccaccaaccggccg
gaccttttggatagctcgttgctccggccgggcaggttcgatcgtttagtttatattccc
atgccggataaagaagctcgtcagaagatactggagatctatctctcaaagatgcccgcc
tatgaggtctctgctcaatggctggcggatatcactgagaacttcagcggtgccgatctg
gagatgctctgccgggaggcggggatgctcgctttgcgggagcatatccggccgggaatg
aaaagagaagagctgatagttgacaagatccttgttacagagaagcgtttccaggaggcc
agcgagtatatcaggccgcatctgtcaaaagatatgctgcagggatacaccaagatgatc
cgtgaattccaggtatga
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