Methanothrix soehngenii: MCON_2907
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Entry
MCON_2907 CDS
T01468
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mcj
Methanothrix soehngenii
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcj03016
]
MCON_2907 (endA)
Enzymes [BR:
mcj01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MCON_2907 (endA)
Transfer RNA biogenesis [BR:
mcj03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MCON_2907 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AEB69266
UniProt:
F4C0S8
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All DBs
Position
complement(2470834..2471886)
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AA seq
350 aa
AA seq
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MPEEIRAQFEDDRIRLGPEALPELFEQGYFGRPKGKGLELSLVEAAYLLDRSRIKIMRNE
KELDFRSFFQAASSMEKGFEFRYVVYKDLRERGYYVQPGRPDFRVYPRGGHPGKGPAEFY
VLVISERNPLPLKDIMEPVRLAGQMRKKLMLAIVDEESDITFYEARERSMAGMMAGLENG
GMATLLEDRVVLWDTEASRLLHESGFFGKPVGERLQLSLVESAYLLEKGKLQLTDRQGRP
VDLPALTARAEQIDEDFELKLGAYRDLREKSLVVKTGFKFGTHFRVYKQVHGTLKVPHSE
YLVHAIPLDHVFMPPVLSRAVRLAHSVRKLMVFAYPDDGIGYLEIKRLKP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggagattcgggcccagtttgaggacgataggatccgcctgggccctgaggcc
ctgcctgaactattcgagcagggctacttcggccggcccaaggggaagggcttggagctc
tcattggtggaggcggcctatctcctggatcgatcaagaataaagataatgcgcaatgag
aaggagctggacttcagatccttttttcaagctgcctcctcaatggagaaggggtttgag
tttcgctatgtggtctacaaggatctgagggagcggggctactacgtccagcccggcaga
ccggattttcgggtctaccccaggggaggccacccgggaaaggggccggcggaattttat
gttctggtcatatcggagcgcaatcccttgcctttaaaggatatcatggagcccgtccgc
ctggctggacagatgagaaagaagctcatgctggccattgtggacgaagagagcgacatc
accttttatgaggcacgcgagcggtcgatggccgggatgatggccgggctggagaacgga
ggcatggccaccctgctggaggaccgggtggttctatgggacacggaggcctctcgtctt
ctgcatgagagtggattttttggtaagcccgtgggcgaacggctgcagctctctttggtc
gagtcggcatacctgctggaaaaaggcaaacttcagctgactgaccgccagggaagaccg
gtcgacctgcctgctctcaccgccagggcagagcagatcgatgaggacttcgaactcaag
ctgggcgcctaccgggacctgagggagaaaagcctggtggtcaagacgggattcaagttc
ggcacccactttcgggtctacaagcaggtacacgggactctaaaagtccctcactctgag
tatctggtgcatgccatccctctggatcatgtcttcatgcctccggttctctcccgcgcc
gtccgcctggcccattcggtgagaaagctgatggtgttcgcttatccggatgacgggatc
ggatatctggagatcaaaaggctgaagccttga
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