Methanothrix soehngenii: MCON_3174
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Entry
MCON_3174 CDS
T01468
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mcj
Methanothrix soehngenii
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcj03016
]
MCON_3174 (truD)
Enzymes [BR:
mcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MCON_3174 (truD)
Transfer RNA biogenesis [BR:
mcj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MCON_3174 (truD)
Prokaryotic type
MCON_3174 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEB69464
UniProt:
F4BU87
LinkDB
All DBs
Position
complement(2671455..2672732)
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AA seq
425 aa
AA seq
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MKLASEQDRFLGMDYYITDSPGCGGIIRRNPEDFLVVEVFEDLGYEGGRYLVIEVEKTDW
DTHHLIREMSRHLRISQKRFGWAGTKDKRAITRQRISIMNLDESELDRIRLPDIKINVLG
RTNRAVGLGDLLGNRFSITIRELSCPDPARSLASVSEEIKRHKGVANYFGVQRFGDIRPI
THLVGEALARGKAEEAARIFLALPYAGEQERTREARERLWESGDIQAARNDFPGYLHHEL
AMLNYLAEHPGDYAHSFDVLSVNLKRLFVHAYQSYLFNRILSLRLAKSMPLDEALVGDVV
CFSKGGMPDMDKTQEVTEDNLEAIARLVNRGRAFVTLPLIGFESRLAEGRQGEIERQVLQ
EEDILPEGFKVVENPDLGSRGTRRTALCPVDPKIRVEGDSAQLEFILPKGSYATVVLREY
MKDAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggcaagcgagcaagacagatttctgggcatggactactacatcaccgacagt
cctggctgtggaggtataatcagaagaaatcccgaggactttttggtggtggaggtcttc
gaggacctcggctatgaagggggaaggtacctggtcatagaagtagagaagactgactgg
gatacccatcacctcatccgggagatgtccaggcatttgcgtatcagccagaagaggttc
ggctgggcagggacaaaggacaagagggcaataaccaggcagaggatcagcatcatgaat
ctggatgaatcggagctcgataggatccgcctccccgacatcaagataaatgtgctgggc
aggacgaacagggcagtaggtctgggcgaccttttgggcaaccgcttctccatcaccatt
cgagagctctcctgccccgatccggcccgtagcctcgcctccgtcagcgaggagatcaag
aggcacaagggggttgccaactacttcggtgtgcagaggtttggggacataaggccgata
acccatctggtgggtgaagccctggccaggggaaaggccgaagaggctgcccgcatattc
ctcgccctgccctatgctggagagcaggagaggacgagagaggcgagagaaaggctgtgg
gagagcggggatattcaggccgcccgcaatgattttcctggctacttgcaccatgagctg
gccatgctcaactatctggccgagcatcctggtgactatgcccattcctttgatgttctt
tccgtcaatttgaagcggctctttgtgcatgcctatcagtcatacctcttcaaccgcata
ctcagcctccgactggcaaagtcgatgcccctggatgaggctcttgttggggatgtggtc
tgcttttccaaagggggcatgccagatatggacaaaacccaggaggtgactgaggataac
ctggaggcgatagccaggctggtgaatagaggccgggcatttgtcaccctgcccctgatc
ggatttgagagccgtctggcagagggcagacagggagagatcgaaagacaggtcctgcag
gaagaggacattttgccggagggcttcaaagttgtggagaatccagacctgggctcgcgg
ggcacgagaagaacagctctctgcccggtcgatccgaagatcagggtggaaggggattca
gcccagctggaattcatcctgcccaaagggagctatgccactgtggtgctgagagagtat
atgaaagatgctagttga
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