Macrococcoides caseolyticum: MCCL_0472
Help
Entry
MCCL_0472 CDS
T00848
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcl
Macrococcoides caseolyticum
Pathway
mcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCCL_0472 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcl03019
]
MCCL_0472 (recQ)
03400 DNA repair and recombination proteins [BR:
mcl03400
]
MCCL_0472 (recQ)
Enzymes [BR:
mcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCCL_0472 (recQ)
Messenger RNA biogenesis [BR:
mcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCCL_0472 (recQ)
DNA repair and recombination proteins [BR:
mcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MCCL_0472 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
P-loop_SecA
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
BAH17179
UniProt:
B9EAB8
LinkDB
All DBs
Position
499595..501361
Genome browser
AA seq
588 aa
AA seq
DB search
MKHILQEYFGYSSFRPGQQQLIDYAINNIPTLGILPTGGGKSICYQVPGIYKGGLTLVIS
PLISLMKDQVDALNASGIKASYINSSLTKQEVRAVEAQLISGECQFLYVAPERFDNHSFQ
QLLYSLDIRLVAFDEAHCISKWGHDFRPSYRDVVQKVMTLPHHFTLMALTATATVDVKED
ICSLLHIQLEHVVETSTKRENLKFIVDPTYQKQKMVIDYIKSHSDASGIIYASTRKQVEL
LSEVFEVNQIRHTLYHAGLKKEEKERNQSAFVRDDIPVMIATNAFGMGIDKSNVRYVIHY
NMPQDLESYYQEAGRAGRDGLKSECILMYSEADIKLQYFFIETAPEAVQELKKDKLSKMI
QYTKTKRCLQSTIINYFNPNEPLKNCGQCSSCLRQDENYNMTTEAKQILSCLIRIKVPVT
KLLLSKVLHGESDNQIHNESLHKLSTYGLLKNYEASAVQSFIDTLIFNGYIRIHDHHLYC
DDSAKAILFNEKQVMTYYKPNQYNEKVKITTIDAVDDTLLRALKTARKELSERLDVPPFT
IFSDHTLELFADKKPISKEDMILIEGVGSYKLKHYCPKFIEVIQDYVS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacatattacaagaatattttggttattccagctttaggcccggacagcaacaa
ttaatagattatgcgataaataatattccgacactgggcattcttccgacaggtggcggg
aaatctatatgctatcaagttccgggtatctacaaaggaggattgacgcttgtcataagc
ccgctcatctcattgatgaaagaccaggtggatgcactcaatgcgagtggtattaaagct
agttatatcaattcttcattaacgaaacaagaagtgcgtgcagttgaagcacaattaatt
tcaggtgagtgtcaatttctatatgttgcgcctgaacgatttgataatcattcttttcag
cagctgttatactcccttgatattcgacttgttgctttcgatgaggcacactgcatatca
aaatggggacatgactttagaccaagctaccgtgacgtcgtacaaaaagtgatgacgtta
cctcatcattttacgcttatggcattaacagcgacggctactgtagatgttaaggaggat
atatgcagcttactgcatattcaactagaacatgttgtcgaaacaagtacaaaaagagaa
aacttgaagttcatcgtagacccaacgtatcagaaacaaaagatggtgattgactatata
aagagtcatagtgatgcatcaggaattatctacgccagcacaagaaagcaagtagagttg
ttaagtgaagtgtttgaagtgaatcagattcgtcatacactttatcatgccggacttaag
aaggaagaaaaagaacgtaatcaaagtgccttcgttcgagatgatattccagtaatgatt
gcaacgaatgcatttggaatggggattgataaatccaatgtcagatatgtcattcattat
aatatgccgcaggacttagagagctattatcaggaggccggtcgtgcaggccgtgatgga
ttgaagagtgagtgtattttaatgtattcagaagcggatattaagctgcagtatttcttt
attgagacagcaccggaggcagtacaggaattaaagaaagacaaactgagtaaaatgatt
caatatacgaagacgaagcgctgtctgcagtcaaccatcattaattactttaatcctaat
gagccactgaaaaattgtggtcagtgctccagctgtctgagacaggatgagaattataat
atgacaacagaagcgaaacaaatattaagttgtctcatccgtataaaggttcctgtaacc
aaacttctgctttctaaagtactgcatggagaaagtgataatcagattcacaacgaatca
ctgcacaagctctctacttacggcttattaaaaaactatgaagcaagcgctgttcaatca
tttatcgatacgttaatctttaatggctatataagaattcatgatcaccatctatattgt
gatgattcagcaaaagctatcttatttaatgagaaacaggtgatgacatattataaacca
aatcaatacaatgagaaagtcaagattacaacgatagacgctgtagatgatacgttacta
agggcacttaagacagcgcgtaaagagttaagtgagcggctggatgtaccaccgtttacg
atattttctgatcatacactcgagctttttgctgataaaaaacctatatctaaagaagat
atgatactgatcgaaggggttggatcctataaactaaagcattattgtcctaagtttatt
gaagtgattcaagattatgtaagctaa
DBGET
integrated database retrieval system
