Macrococcoides caseolyticum: MCCL_0834
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Entry
MCCL_0834 CDS
T00848
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcl
Macrococcoides caseolyticum
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcl03032
]
MCCL_0834 (topA)
03400 DNA repair and recombination proteins [BR:
mcl03400
]
MCCL_0834 (topA)
Enzymes [BR:
mcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MCCL_0834 (topA)
DNA replication proteins [BR:
mcl03032
]
Prokaryotic type
DNA Topoisomerases
MCCL_0834 (topA)
DNA repair and recombination proteins [BR:
mcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MCCL_0834 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Toprim_4
DUF2996
Toprim_2
HypA
Motif
Other DBs
NCBI-ProteinID:
BAH17541
LinkDB
All DBs
Position
909469..911532
Genome browser
AA seq
687 aa
AA seq
DB search
MAENLVIVESPAKAKTIEKYLGKKFKVVASMGHVRDLPRSQMGVDTENDFEPRYITIRGK
GPIVQDLKKHAKRAKHVYLASDPDREGEAIAWHLAHILNIDEKAASRVVFNEITKDAVKE
SFKHPRQIEQNLVDAQQARRVLDRLVGYNISPVLWKKVKKGLSAGRVQSVALKLIIDREE
EINAFKPEEYWTIDGLFEYDRKQFKAKFLHENNKPKKLKQEDDVKAIVKQLKSDAFEVTD
VTKKEKLRNPAQPFTTSSLQQEAARKLNFKARKTMMLAQQLYEGIDLKKQGAVGLITYMR
TDSTRISDTAKNEAASYIEEHYGKAYLSKRSSKSGGAQDAHEAVRPTSVMRTPSEMKAYL
SRDQLRLYKLIWERFMASQMAAAVIDTVSVDLVQNNIKFRANGQTIKFKGFMSVYIEGQD
EETEDGENKLPVLEVGDTVKAVNIDENQHFTQPPPRYTEARLVKTMEEKGIGRPSTYAPT
IDTIQKRNYVKVDQKKFYPTELGIIVNESVKEYFPEIIDVDFTVNMETLLDKIASGDMEW
KKVISTFYGDFKTHVERAEAEMEKIEIKDEPAGEDCEKCGSPMVYKMGRYGKFMACSNFP
ECRNTKAIVKTIGVACPKCKDGEVVERKSKKNRIFYGCSNFPECDYISWDKPIARNCPKC
DTQLVERKKGKQTQVVCTNCDYDEKPQ
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaaatctcgtcattgttgagtcgcctgcaaaagctaaaaccattgaaaaatat
ttagggaagaaatttaaagttgtcgcatctatggggcatgtacgtgatctaccacgtagc
cagatgggcgttgatactgaaaatgattttgaaccaagatatataacgattagaggaaaa
gggcctatcgttcaagatttaaaaaaacatgcaaagcgcgcgaagcatgtctatcttgca
agtgacccggaccgtgaaggtgaagcgattgcctggcatttggcacatatactgaatata
gatgaaaaagcagcgtccagagttgtattcaatgaaattacaaaggatgctgtcaaagag
agttttaagcatccaagacaaattgaacagaatcttgttgatgcacagcaagcacgacgc
gtacttgaccgtctcgtaggctataacatttctccggtattgtggaagaaagttaaaaag
gggctttcggctggccgtgttcaatctgtagcacttaagcttattattgatcgagaagaa
gaaatcaatgcatttaaaccagaggagtactggacgattgatggattgtttgaatatgac
agaaaacagttcaaggcaaagttcttacatgagaataataagcctaagaaattaaaacaa
gaagacgatgttaaagcgattgtcaaacaactgaaatcagatgcatttgaagtaacggat
gtgactaaaaaagaaaagctcagaaatcctgcacaaccatttacgacgagttcactccag
caggaagctgctcgtaagctaaactttaaagcccgtaagacgatgatgcttgctcagcaa
ttatatgaaggaatagacttgaagaaacaaggtgcagtgggtttaattacttatatgcgt
acagattctactcgtatttcagatactgcaaagaacgaggctgcgagctatattgaagaa
cattatggtaaagcatacttgtctaaacgcagtagtaagagtggcggtgctcaagatgca
catgaagcagtacgtccaacatcggtgatgcgtacgccttctgagatgaaagcttatctt
tctagagatcagctacgtctatacaaattgatctgggagcgttttatggcaagtcaaatg
gctgcagcagtcattgatacggtcagtgtagaccttgttcagaataatattaaattcaga
gcgaatggtcagacgattaagtttaaaggatttatgagtgtgtacatcgaaggtcaggat
gaagaaactgaagatggagagaataaattaccggtgctggaagtgggtgatacagttaag
gctgttaatatcgatgaaaaccaacatttcacgcaaccacctccgcgctatactgaagcc
cgtcttgttaaaacgatggaagaaaaaggtattggtcgaccttcaacgtatgcaccaact
atagatacgatccaaaagcgtaattacgtaaaggtagaccagaagaaattttatccgaca
gagcttggaatcattgtcaacgagtctgttaaagaatatttccctgaaattattgatgtt
gatttcacggtgaatatggaaacattattagacaaaattgccagtggagatatggaatgg
aagaaggtcatttcaactttttatggtgatttcaaaacacatgttgaacgtgcggaagca
gaaatggaaaagattgaaatcaaagacgaaccagcaggagaagattgtgagaaatgcggt
tctccgatggtatataaaatgggacgttacggtaaatttatggcctgttcaaatttccct
gaatgcagaaatacaaaagcaatcgtcaaaactattggtgtagcctgtccaaagtgtaaa
gatggcgaagttgttgaacgtaaatctaagaaaaatagaattttttatggctgtagcaat
tttccggaatgtgattatatttcctgggataaacctattgcaagaaattgtccgaagtgt
gacacacagcttgtggaacgtaaaaaaggaaagcagacacaagttgtatgtacgaattgt
gattacgatgagaaacctcaatag
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