Macrococcoides caseolyticum: MCCL_0862
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Entry
MCCL_0862 CDS
T00848
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase homolog
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcl
Macrococcoides caseolyticum
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcl03016
]
MCCL_0862 (truB)
Enzymes [BR:
mcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MCCL_0862 (truB)
Transfer RNA biogenesis [BR:
mcl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MCCL_0862 (truB)
Prokaryotic type
MCCL_0862 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAH17569
UniProt:
B9EBF8
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All DBs
Position
946464..947360
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AA seq
298 aa
AA seq
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MDGIIGINKARGMTSHDVVFKLRKILRTKKVGHTGTLDPEVDGVLPICVGKATRISDYVM
QSGKRYIAEVTLGVQTATEDAHGEIVKTVSIEEGMFTEAQVDEVLLRLTGSIRQVPPMYS
AVKVKGRKLYEYAREGIEVERPERTVQIYELIRTSAVRFMDGKCIFNIEVACGKGTYIRT
LATQIAEGLGTIGHMSDLTRTESGGFKLEDCITIDALREVPYDAIAELLKPIETGLAHMR
HVAVDEPTSVKIMYGQKLRQMSPPIEDETVMTYNDKVIAIFIPDDKHPGLIKAKKVFN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggatggcattatcggtattaataaggcacgtgggatgacgagtcacgatgtggtgttt
aagctacgtaaaatattaaggacgaagaaagtcggccacaccgggacgcttgatcctgaa
gtggatggggtattgccgatttgtgtcggtaaggcgacgcgtatcagtgattatgtgatg
cagagcggtaaacgttatattgcagaagtgacccttggcgttcagacggcgactgaagat
gctcatggtgagattgtgaagaccgtatcgattgaagaggggatgttcacagaggcgcag
gttgatgaagtattacttcgactaacgggttcaatcagacaagttccaccgatgtattcg
gcggttaaggtgaaagggcgcaaattgtatgaatatgcacgtgaaggaattgaggttgag
cgtccagaacgtacagtgcagatttacgaattaatacgtacaagtgctgttcgttttatg
gatggtaaatgtatattcaatattgaagtcgcatgtggtaaagggacatatattagaaca
cttgctactcagatagcagaaggtctgggtactattggccatatgtcagatttgacacga
acggagagcggtggatttaagcttgaagactgtattacgatagatgcgttacgtgaagta
ccctatgatgcaatagctgagcttctcaaaccgatagagacagggctcgcccatatgcgg
catgtcgctgtcgatgagccgacatccgtcaagattatgtacggccaaaagttacgtcag
atgagcccaccgattgaagatgagacggtgatgacgtacaatgataaggtaatagcaatt
ttcataccggatgacaagcatccaggtttgatcaaagctaaaaaagtatttaattag
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