Macrococcoides caseolyticum: MCCL_1208
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Entry
MCCL_1208 CDS
T00848
Name
(GenBank) ATP-dependent RNA helicase homolog
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
mcl
Macrococcoides caseolyticum
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcl03019
]
MCCL_1208
03009 Ribosome biogenesis [BR:
mcl03009
]
MCCL_1208
Enzymes [BR:
mcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCCL_1208
Messenger RNA biogenesis [BR:
mcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCCL_1208
Ribosome biogenesis [BR:
mcl03009
]
Prokaryotic type
rRNA helicases
MCCL_1208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAH17915
UniProt:
B9E6U7
LinkDB
All DBs
Position
complement(1310790..1312121)
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AA seq
443 aa
AA seq
DB search
MMDKHPFEHFELAPYLIEAVKDLNFNQPTEIQRRVIPKLKKETHLIGQSQTGTGKSHAFL
LPLINKIDKDLIQPQMIILAPTRELAKQLYDASEHLISFTEGIKAGLYIGGTDKNKDIQK
SKVQPQIVIGTPNRIKDLAEENVLHIHLANAVVVDEADLMIDLGFLPTVDKIAANVSRDA
QIAVFSATIPKALHPFLNKYLSKPEFIEIEPDSKTNKNITFYLVPTKSNDKKEKLVSVMN
TCNPYLAIIFANSRDRADELAEFLQDQGLKVGIMHGGLAPRERIQMMKRVKNLEFQYIIA
SDLASRGIDIEGVSHVFNYDIPKDIDFFTHRVGRTGRGNYTGVAITLYTPDEEDLINQIE
KKGFSFIHSDIKNGELTEIKDRTERRSRQKKEDNIEKSLVHKVKKKKKVKPGYKKKFRYE
LDKIKRNEKKAHSKRVNKQNRKG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaaacacccatttgaacattttgaacttgcaccatatttaatagaagcggtg
aaggatctaaatttcaaccagcccacagaaatccagagaagagttattccaaaattaaaa
aaagaaacacatttaatcggacaatctcaaactggtacaggtaaatcacatgcattcctg
ttgccgttaatcaataaaattgataaagatttaattcagccgcaaatgattattctagca
ccgacacgtgaacttgcaaaacaattatatgatgcaagtgaacatcttatttcctttaca
gaaggtattaaagcagggctttacattggaggaacggataagaataaagatatacagaaa
tcaaaagtacagccacaaatcgtaattggtacaccaaaccgtatcaaggatctagcggag
gaaaatgtactgcatattcatttggcaaatgcagtagtggttgatgaagcggatttaatg
atcgatcttggattcttaccgacagtggataaaattgctgcgaacgtatcacgcgatgct
cagattgctgtcttttcagcaacgattcctaaagcattgcatccatttttaaacaaatat
ttatcaaagccggaatttatcgaaatcgaaccagatagtaagacgaataagaatattacg
ttctaccttgtcccgacaaagagtaacgataaaaaagaaaagctagtgagcgttatgaac
acgtgtaatccgtatttagcgattatctttgcaaatagtcgtgatcgtgcagatgaactt
gctgaatttctgcaggatcaaggattgaaagttggtatcatgcatggagggctggcacct
cgtgaacgtatccagatgatgaaacgcgtcaagaacttagaattccaatatattatagcg
agtgatcttgcaagccgaggtattgatattgaaggtgtaagtcatgtatttaactatgat
attccaaaagatatcgatttcttcacacatcgtgtaggtcgtacaggacgcggtaattac
actggtgtagcaatcacgctatacacaccagatgaagaagatttaattaatcagatcgag
aaaaaaggcttctcatttattcattcggatattaaaaacggagaactcacagaaattaaa
gatcgtactgagcgtagaagtcgtcagaaaaaagaagataatattgaaaaatctttagtt
cataaagtgaagaagaaaaagaaggtaaaaccgggttataagaagaagttcagatatgaa
ttagataagattaaacgcaatgaaaagaaagcacactctaaacgtgtaaacaagcagaac
agaaaaggttaa
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