Macrococcoides caseolyticum: MCCL_1273
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Entry
MCCL_1273 CDS
T00848
Name
(GenBank) conserved hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mcl
Macrococcoides caseolyticum
Pathway
mcl03410
Base excision repair
mcl03430
Mismatch repair
mcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCCL_1273
03430 Mismatch repair
MCCL_1273
03440 Homologous recombination
MCCL_1273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcl03400
]
MCCL_1273
DNA repair and recombination proteins [BR:
mcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MCCL_1273
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MCCL_1273
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MCCL_1273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF4385
Motif
Other DBs
NCBI-ProteinID:
BAH17980
UniProt:
B9E712
LinkDB
All DBs
Position
complement(1377780..1380041)
Genome browser
AA seq
753 aa
AA seq
DB search
MDKTVWTVKKPVDTIPAALIKKYDITEINRKILESRHIVTEAALHDIFVADDIHDPFAMH
DMSKAVKRIQTAIDNNEMILVYGDYDADGVTSVTVLVNSLKSIGAKVGWYIPNRFTEGYG
PNEQAFREAHDAGISLIITVDNGIQGHHEVNVANELGIDVIITDHHEIGQTLPDAYAILH
PMHPDGSYPFHHLAGVGVSYKLACALNGQMNEHLLGFVAIGTISDLVSLTGENRALVKRG
LKALNVDTPIGLKALLKQASFNGEITEETVGFIIGPRLNAVGRLDDARLACELLQIDNED
EAEWMSEQVDQFNIERKEIVSSITEQALIDVEEKIANGNRFIVVAKEGWNEGVLGIVASR
ITEQYHLPAIVLNIDYDKGYAKGSARSIAQVSMYDSLEETRNLITKFGGHHMAAGMTLPI
ENIERLEQALNNHLDTLIDGEIIQEIEIDAAVEMSDITIKNINDMDKLRPFGTDFSAPLL
SLMNAKLTDVKQIGQNQAHLKMTVQNTLNALMWNEGARISGLPVGSQVNLAGTLQLNEWN
GNVQPQMIVRHIKQDTMQMIDFRNVHPNSYKFLKTEQAAFVINPRKNKLNEHYFYYGEMI
SGYDKVVFRDLPESEERFLETYHSLDATLIYFIFHTPRQLYFEGMPTAEKFKLLYKCIII
KPEINLEKEGGYLLQTINVSPDTLLFMLDVYHEVGLIVKEGQFIKKQEVDKKVDLLSSST
YQARLNQLKLESKLLFSSFDELKQFILSNNSLS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaactgtatggacagtcaaaaaacctgtagatacaattcctgcagcgttaatt
aaaaaatatgacatcactgaaattaataggaagatattagagtctcgtcatattgtgacg
gaagcagcattacatgatatttttgtggcagatgacattcatgatccatttgcgatgcac
gatatgagtaaagcagttaaacgtattcaaaccgcgatagataataatgaaatgatactc
gtttatggagattatgatgcagatggtgtaacaagtgtcactgttctcgttaacagcttg
aaatctatcggtgcaaaggtaggctggtacattccgaatcgttttacagaaggatatgga
ccaaatgagcaggcctttcgtgaagcgcatgatgcgggtatatctttaatcattacggtt
gataacggaatacaaggtcatcatgaagtaaatgttgcgaacgaactaggtatagatgtt
attattacagatcaccacgagattggtcagacccttccagatgcatatgcaattttgcat
ccgatgcatccggatggcagctatccctttcaccatctcgcaggtgtaggggtgagctat
aagcttgcgtgtgcgctaaacgggcagatgaatgagcatctactcggatttgttgcgatt
ggtacaatcagtgatcttgtatcattgacgggtgagaatcgagcgctcgtaaagcgggga
cttaaagccttaaatgtagatacaccgattggtttaaaggcattactcaagcaagcctct
tttaatggtgagatcacggaagagacagtcgggtttattataggtccgagactgaatgca
gtcggtagattagatgatgcacgattagcatgcgaattactgcagatagataatgaagat
gaagcagagtggatgagcgaacaagtcgatcagttcaatattgaacgcaaggagattgta
agctcgattactgaacaagcattgatagatgttgaagaaaaaatcgctaatggcaatcgt
tttatcgttgttgcaaaggaaggctggaacgaaggtgtgctcggcattgtcgcaagtaga
attacagagcagtaccatttacccgcaatcgtattgaacattgattatgataaaggctac
gcgaaaggctctgcaagaagtattgcgcaagtatcgatgtatgacagtcttgaggaaacg
agaaatcttattactaaatttggtggacatcatatggcggctgggatgacattgcccatt
gaaaatattgaacgactcgaacaagcattgaataaccatttagatactttgatcgatggt
gaaatcattcaggaaatagaaattgatgctgctgttgaaatgtcagatattacaataaaa
aatattaatgatatggataaactcagaccgttcggaacagacttcagtgcccctttactc
tcattaatgaatgctaaattaacagacgtgaagcaaattgggcagaaccaggctcattta
aagatgactgttcaaaatacacttaatgcacttatgtggaatgaaggtgcaagaatatca
ggccttccagtaggcagtcaagtgaatttagcaggtacgctgcaactaaacgaatggaat
ggcaacgttcagccacagatgattgtacgtcatataaagcaagacactatgcagatgatt
gattttagaaacgtacaccccaattcatacaaatttttaaagaccgaacaagctgctttt
gttattaatccacgtaaaaataaattaaatgaacattatttttattatggtgaaatgata
tcgggttatgacaaagttgtattccgcgatctgcctgaaagtgaagaaaggtttctagag
acttatcacagtctggatgcgacattaatctattttatatttcacacaccaagacaatta
tattttgaaggtatgccgacagcagagaaatttaagctgttatataaatgcatcatcata
aaaccagagattaatctagaaaaagaaggcggttatctacttcagaccataaatgtgtca
ccggatactttgctgtttatgctggatgtgtatcatgaagtcggccttattgttaaagaa
ggtcaatttataaaaaagcaggaagttgataaaaaggtcgatttattgagctcaagtact
tatcaagcacgattaaatcagttaaaattagaaagtaagctattgttttcatcattcgat
gaattaaaacaatttatcttatcgaataactcattgtcctag
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integrated database retrieval system
