Paenimyroides cloacae: P3875_03550
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Entry
P3875_03550 CDS
T09249
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mcla
Paenimyroides cloacae
Pathway
mcla02020
Two-component system
mcla02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P3875_03550 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P3875_03550 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcla03021
]
P3875_03550 (rpoN)
Transcription machinery [BR:
mcla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P3875_03550 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
MarR
HTH_12
Motif
Other DBs
NCBI-ProteinID:
WKW47145
LinkDB
All DBs
Position
complement(724764..726227)
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AA seq
487 aa
AA seq
DB search
MLKQNLQLKLSQKLSPQQIQLMKLIQLPTLAFEQRLKEELVENPALESGKEDTIENDEFQ
DNSDDYDDYDNEHIDTEDINIDDYLSDDEVPDYKLKSNNYSDDDDDTFMPIEAQISFHQS
LIEQLNTFILNDEQRVIAEFLIGSMDDMGYIRRDIQDIVDDMAFTQGVYTSEEQVQHILE
SIIHELEPSGVGARDLQECLLLQLQSKTPNESVDLAKDIIENQFDAFTKKHYDKLLQKYN
VTQTQLRKAIDEIEKLNPKPGGSFSGNARAVEHIIPDFTVKVDDGEIELFLNSRNVPELH
VSKDYQEMLQTYKETNQKSAAQKDAVQFIKQKLDGAKWFIDAIKQRQETLFVTMSAIIDY
QKEYFLDGDETKIRPMILKDIADKIGLDISTISRVANSKYVDTPYGTKLIKEFFSEAMVN
DQGEEVSTIEIKKILQNIIEDEDKQKPLPDDKLAEMLKEKGYPIARRTVAKYREQLDIPV
ARMRKKI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaaaacttacagttaaaattatcgcaaaaactatcgccgcagcaaattcag
ttaatgaaactgatacaattgcctacgcttgcctttgaacaacgtttaaaagaagaattg
gtagaaaaccctgccctagaatctgggaaagaagacaccattgaaaacgatgaatttcaa
gacaattctgatgattacgatgattacgacaacgaacatatcgataccgaagatattaac
atcgacgattatttaagcgacgatgaagtacccgattataaattaaaaagcaataattac
agtgatgatgatgacgatacatttatgccaattgaagcacaaattagtttccatcaaagt
ttaattgaacaactaaacacctttattttaaatgatgaacagcgtgtaattgccgaattt
ttaattggtagcatggacgatatgggctacatacgcagagatattcaagatattgtagac
gatatggcgtttacccaaggtgtttacaccagtgaagaacaagtacagcatattttagaa
agcattattcacgaattagaaccaagtggcgttggtgcacgtgatttacaagagtgctta
ttactgcaattacaaagtaaaactcctaatgaatcagttgatttagcaaaggatattatt
gaaaaccaatttgatgcgtttacaaaaaaacactacgataagttgttacaaaaatacaat
gtaacccaaacgcaacttagaaaagctattgatgaaattgaaaaattaaatcctaaacca
gggggtagtttttctggtaacgcacgtgctgttgaacatatcattcctgattttacagta
aaggttgacgatggcgaaattgaattattcttaaacagccgcaacgtacccgaattgcat
gtttctaaagattatcaagaaatgttgcaaacgtataaagaaaccaatcaaaaatcggca
gcacaaaaagatgcagtacaattcattaaacaaaaattagacggtgctaagtggtttatc
gatgccataaaacagcgtcaagaaacactttttgttacaatgagcgctataattgattat
caaaaagaatactttttagatggcgatgaaaccaaaatcagacctatgattttaaaagat
attgccgataaaattggtttagatatttcaactatttcacgagttgcaaacagtaaatac
gtagatacgccctatggcactaaattaattaaagaatttttctctgaagcaatggtaaac
gatcagggtgaagaagtttcaaccatagaaattaaaaagattttgcaaaacattatagaa
gatgaagacaagcaaaaacctttacccgatgataaactagccgaaatgttaaaagaaaaa
ggctaccctattgcacgaagaaccgttgcaaaataccgcgaacagttagatattccggtg
gcgcgaatgcgtaaaaagatataa
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