Myroides sp. JBRI-B21084: P3875_04480
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Entry
P3875_04480 CDS
T09249
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mcla
Myroides sp. JBRI-B21084
Pathway
mcla00300
Lysine biosynthesis
mcla00470
D-Amino acid metabolism
mcla01100
Metabolic pathways
mcla01110
Biosynthesis of secondary metabolites
mcla01120
Microbial metabolism in diverse environments
mcla01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P3875_04480 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P3875_04480 (dapF)
Enzymes [BR:
mcla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
P3875_04480 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
FAIM1
Motif
Other DBs
NCBI-ProteinID:
WKW47325
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All DBs
Position
908408..909199
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AA seq
263 aa
AA seq
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MKQLTFYKYQGTGNDFVMVDNRSDFFPKDNVQLIAHLCDRRFGIGADGLILLENDLSADF
KMVYYNADGNQSTMCGNGGRCIVAFAHDLGVIQNQTVFNAVDGLHHATINNDKIVALQMI
DVLKNTIESNTNDTFLFTGSPHHVQFVQNLNTFNVFENGKTIRYSEKYKPGGTNVNFVEQ
LNENSLEIRTYERGVENETLACGTGATAVAIATHFLGKTSVNEIAIKVQGGNVTVTFEHD
LEKYFNVHLTGPALQVFKGEIKI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaacattttataagtatcaaggcacaggaaacgattttgtaatggttgat
aaccgtagtgatttttttcctaaagataacgtacaactaatagcgcatttatgcgataga
cgatttggtattggtgccgatggattgattttattagagaacgatttatctgccgatttt
aaaatggtatattacaatgccgatggtaaccaaagtaccatgtgtggtaatgggggcaga
tgtattgttgcgtttgcacatgatttaggtgttatacaaaaccaaactgtttttaatgct
gttgatggtttacaccacgctactattaataacgataaaattgttgctttacaaatgatt
gatgttttaaaaaacacaatagaaagcaatacaaatgatacttttttgtttacgggttca
ccacatcacgtgcaatttgtacaaaacttaaatacgtttaacgtatttgaaaatggaaaa
acaattcgttacagtgaaaaatataaacctggaggaaccaatgtaaattttgttgagcaa
ttaaacgaaaattctcttgaaattcgcacgtacgagcgcggtgttgaaaatgaaacatta
gcatgtggtactggtgctactgctgttgcaattgctacacattttttaggaaaaacatct
gtaaacgaaattgcaataaaagtacaaggtggaaatgttactgtaacttttgaacatgat
ctagaaaagtattttaatgtacatttaactggtccagctcttcaagtttttaaaggcgaa
ataaaaatataa
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