Myroides sp. JBRI-B21084: P3875_06980
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Entry
P3875_06980 CDS
T09249
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mcla
Myroides sp. JBRI-B21084
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcla03009
]
P3875_06980 (rimO)
Enzymes [BR:
mcla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
P3875_06980 (rimO)
Ribosome biogenesis [BR:
mcla03009
]
Prokaryotic type
ribosomal protein modification factors
P3875_06980 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
WKW45531
LinkDB
All DBs
Position
complement(1440740..1442056)
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AA seq
438 aa
AA seq
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MRTKSLRKNKINVVTLGCSKNVYDSEVLMGQLKASGKDVTHEATNDEANIVVINTCGFIN
NAKEESVNTILEYVDKKEQGLVDKIFVTGCLSERYKPDLEAEIPDVDQYFGTTDLPLLLK
ALGADYRHELLGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGKHVSQPIEKLVKEAE
TLAKDGVKELILIAQDLTYYGLDIYKKRNLAELLEQLAKVDGIEWIRLHYAFPTGFPMDV
LELMKREPKICNYIDIPLQHIADNVLKSMRRGTTYAKTTQLLKDFRAAVPGMTIRTTLIV
GYPGETEEDFEILKNWVKEMRFERLGCFTYSHEENTHAYLLEDDVPADVKQNRANEIMDI
QAQISWELNQEKIGKTFRCIIDRKEGTHFIGRTEFDSPDVDNEVLIDATKHYLKTGDFVA
IEIYDATEFDLYGTPVAK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagaactaaatctttaagaaagaacaaaataaacgtagttacccttggctgttctaaa
aacgtttacgatagcgaagttttaatgggacaattaaaagcaagcggaaaagatgtaacc
catgaagctaccaatgatgaagctaatattgtggtgattaacacctgcggttttattaac
aatgccaaagaagaatcggtaaatactatattagaatacgttgataagaaagagcaaggt
ttagtagataaaatttttgtaaccggatgtttatctgaacgttacaaacccgatttagaa
gcagaaataccagacgtagatcagtattttggcactaccgatttgcctttattattaaaa
gctttaggcgcagattaccgccatgaattacttggcgaacgtttaacaactacgccaaaa
aattacgcgtatttaaaaatttctgaaggttgtgaccgtccgtgttctttttgtgctata
ccattaatgcgtggcaaacacgtatcgcaacctattgaaaaattagtaaaagaagccgaa
actttagcaaaagatggtgttaaagaacttattttaatagcgcaagatttaacttactac
ggtttagatatttacaaaaaacgcaatttagcagaattacttgaacaattagctaaggtt
gatggtatagaatggattcgtttgcattacgccttccctactggttttccaatggatgtg
ttggaattaatgaaacgcgaacctaaaatttgtaattatattgatattccattacaacac
attgcagacaacgttttaaaatcaatgcgacgtggtacaacatatgctaaaaccacccaa
ttattaaaagattttagagcagctgtacctggtatgaccattcgtactactttaattgta
ggatatcctggcgaaaccgaagaagattttgaaatacttaaaaattgggtaaaagaaatg
cgttttgaacgtttgggatgctttacttattcgcacgaagaaaacacccacgcttatttg
ttagaagacgatgtacctgcagatgtaaaacaaaaccgtgccaatgaaattatggatatt
caagcccaaatttcatgggaattaaatcaagaaaaaataggtaaaaccttccgttgcatt
atcgatagaaaagaaggtactcattttattggtagaaccgaatttgattcgcccgatgta
gataatgaagtgcttattgatgctaccaaacattatttaaaaactggcgactttgtagct
attgaaatttacgatgccaccgaatttgatttatacggaactcccgttgctaaataa
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