KEGG   Myroides sp. JBRI-B21084: P3875_07310
Entry
P3875_07310       CDS       T09249                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mcla  Myroides sp. JBRI-B21084
Pathway
mcla00010  Glycolysis / Gluconeogenesis
mcla00020  Citrate cycle (TCA cycle)
mcla00260  Glycine, serine and threonine metabolism
mcla00280  Valine, leucine and isoleucine degradation
mcla00310  Lysine degradation
mcla00380  Tryptophan metabolism
mcla00620  Pyruvate metabolism
mcla00630  Glyoxylate and dicarboxylate metabolism
mcla00640  Propanoate metabolism
mcla00670  One carbon pool by folate
mcla00785  Lipoic acid metabolism
mcla01100  Metabolic pathways
mcla01110  Biosynthesis of secondary metabolites
mcla01120  Microbial metabolism in diverse environments
mcla01200  Carbon metabolism
mcla01210  2-Oxocarboxylic acid metabolism
mcla01240  Biosynthesis of cofactors
Module
mcla_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mcla_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mcla_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mcla_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mcla00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    P3875_07310 (lpdA)
   00020 Citrate cycle (TCA cycle)
    P3875_07310 (lpdA)
   00620 Pyruvate metabolism
    P3875_07310 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    P3875_07310 (lpdA)
   00640 Propanoate metabolism
    P3875_07310 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    P3875_07310 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    P3875_07310 (lpdA)
   00310 Lysine degradation
    P3875_07310 (lpdA)
   00380 Tryptophan metabolism
    P3875_07310 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    P3875_07310 (lpdA)
   00670 One carbon pool by folate
    P3875_07310 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcla04147]
    P3875_07310 (lpdA)
Enzymes [BR:mcla01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     P3875_07310 (lpdA)
Exosome [BR:mcla04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   P3875_07310 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO FAD_binding_2 HI0933_like NAD_binding_8 FAD_binding_3 FAD_oxidored Lys_Orn_oxgnase AlaDh_PNT_C 2-Hacid_dh_C 3HCDH_N GIDA Thi4 Trp_halogenase CBM9_1 UDPG_MGDP_dh_N DUF364 LpxI_N
Other DBs
NCBI-ProteinID: WKW45593
LinkDB
Position
complement(1503472..1504863)
AA seq 463 aa
MKYDIIILGSGPGGYVTAIRASQLGFKVAVVEKENLGGICLNWGCIPTKALLKSAQVFDY
LKHASDYGLTINGEVDKDFNAVIARSRGVAEGMSKGVQFLMKKNKIEVIDGFGKVKPGKK
VDVTDKDGKVTEISAEHIIIATGARSRELPNLPQDGKKVIGYRQAMTLPTQPKKMIVVGS
GAIGVEFAHFYNSMGTEVTIVEFMPNIVPVEDEDVSKQFERSLKKAGINIMTNSSVEKVD
TTGEGVKATVKTAKGEEVLEADILLSAVGIKSNIENIGLEEVGIATDRDKILVNDFYQTN
IPGYYAIGDVVPGQALAHVASAEGILCVEKLAGLHVEPLDYGNIPGCTYAIPEIASVGLT
EKAAKEKGYEIKVGKFPFSASGKAKAAGTPDGFVKVIFDAKYGEWLGCHMIGAGVTDMIA
EAVVARKLETTGHEILKAVHPHPTMSEAVMEAVAAAYDEVIHL
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaaatacgatatcatcattttaggaagcggtccaggtggatacgtaactgcaatcaga
gcatcacaattaggttttaaagttgcagttgtagaaaaagaaaatttaggcggaatttgc
ttaaactggggatgtattcctacaaaagcattattaaaatcggctcaggtttttgattat
ttaaaacacgcttctgattacggtttaacaataaatggcgaagttgataaagatttcaat
gccgttattgcacgttctcgtggtgttgctgaaggaatgagcaaaggtgttcaattttta
atgaaaaaaaataaaattgaagtaatagacggttttggtaaagtaaaacctggcaaaaaa
gtagatgtaaccgataaagatggtaaagtaacagaaatttcggcagaacatatcattatt
gcaacaggtgcacgctctcgtgaattacctaacttaccacaagacggtaagaaagtaatt
ggttaccgccaagcaatgactttacctacacaacctaaaaaaatgattgtagttggttca
ggtgcaattggtgtagaatttgctcatttttacaattctatgggtaccgaagttactatt
gttgaatttatgccaaacattgtacctgttgaagatgaagatgtgtcaaaacaatttgaa
cgttcattgaaaaaagcaggtatcaacattatgactaattcatctgttgaaaaagttgat
actacaggtgaaggtgtaaaagcaactgtaaaaacagcaaaaggcgaagaagttttagaa
gcagatatcttactttctgcagttggaatcaaatcaaacattgaaaacattggtttagaa
gaagttggtattgcaacagacagagataaaattttagtaaacgatttttaccaaacaaac
ataccggggtattatgcgattggcgatgtagttccagggcaagctttggcacacgttgca
tcggcagaaggaatcttatgtgttgaaaaattagctggtttacatgttgaacctttagat
tacggtaatattccaggttgtacgtatgctataccagaaattgcatcggttggtttaaca
gagaaagcagctaaagaaaaaggatacgaaattaaagtaggtaaatttcctttctctgca
tcaggtaaagctaaagctgcaggtacacctgatggttttgtaaaagtaatttttgatgct
aaatacggtgagtggttaggctgccatatgattggtgctggcgttactgatatgattgcg
gaagcagttgttgcccgtaaattagaaactactggtcatgaaattttaaaagcagttcac
ccacaccctactatgagtgaagcggttatggaagctgttgctgctgcttatgacgaagta
attcacttataa

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