Myroides sp. JBRI-B21084: P3875_07310
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Entry
P3875_07310 CDS
T09249
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mcla
Myroides sp. JBRI-B21084
Pathway
mcla00010
Glycolysis / Gluconeogenesis
mcla00020
Citrate cycle (TCA cycle)
mcla00260
Glycine, serine and threonine metabolism
mcla00280
Valine, leucine and isoleucine degradation
mcla00310
Lysine degradation
mcla00380
Tryptophan metabolism
mcla00620
Pyruvate metabolism
mcla00630
Glyoxylate and dicarboxylate metabolism
mcla00640
Propanoate metabolism
mcla00670
One carbon pool by folate
mcla00785
Lipoic acid metabolism
mcla01100
Metabolic pathways
mcla01110
Biosynthesis of secondary metabolites
mcla01120
Microbial metabolism in diverse environments
mcla01200
Carbon metabolism
mcla01210
2-Oxocarboxylic acid metabolism
mcla01240
Biosynthesis of cofactors
Module
mcla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mcla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mcla_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mcla_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
P3875_07310 (lpdA)
00020 Citrate cycle (TCA cycle)
P3875_07310 (lpdA)
00620 Pyruvate metabolism
P3875_07310 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
P3875_07310 (lpdA)
00640 Propanoate metabolism
P3875_07310 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
P3875_07310 (lpdA)
00280 Valine, leucine and isoleucine degradation
P3875_07310 (lpdA)
00310 Lysine degradation
P3875_07310 (lpdA)
00380 Tryptophan metabolism
P3875_07310 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
P3875_07310 (lpdA)
00670 One carbon pool by folate
P3875_07310 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcla04147
]
P3875_07310 (lpdA)
Enzymes [BR:
mcla01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
P3875_07310 (lpdA)
Exosome [BR:
mcla04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
P3875_07310 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
DAO
FAD_binding_2
HI0933_like
NAD_binding_8
FAD_binding_3
FAD_oxidored
Lys_Orn_oxgnase
AlaDh_PNT_C
2-Hacid_dh_C
3HCDH_N
GIDA
Thi4
Trp_halogenase
CBM9_1
UDPG_MGDP_dh_N
DUF364
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
WKW45593
LinkDB
All DBs
Position
complement(1503472..1504863)
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AA seq
463 aa
AA seq
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MKYDIIILGSGPGGYVTAIRASQLGFKVAVVEKENLGGICLNWGCIPTKALLKSAQVFDY
LKHASDYGLTINGEVDKDFNAVIARSRGVAEGMSKGVQFLMKKNKIEVIDGFGKVKPGKK
VDVTDKDGKVTEISAEHIIIATGARSRELPNLPQDGKKVIGYRQAMTLPTQPKKMIVVGS
GAIGVEFAHFYNSMGTEVTIVEFMPNIVPVEDEDVSKQFERSLKKAGINIMTNSSVEKVD
TTGEGVKATVKTAKGEEVLEADILLSAVGIKSNIENIGLEEVGIATDRDKILVNDFYQTN
IPGYYAIGDVVPGQALAHVASAEGILCVEKLAGLHVEPLDYGNIPGCTYAIPEIASVGLT
EKAAKEKGYEIKVGKFPFSASGKAKAAGTPDGFVKVIFDAKYGEWLGCHMIGAGVTDMIA
EAVVARKLETTGHEILKAVHPHPTMSEAVMEAVAAAYDEVIHL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgatatcatcattttaggaagcggtccaggtggatacgtaactgcaatcaga
gcatcacaattaggttttaaagttgcagttgtagaaaaagaaaatttaggcggaatttgc
ttaaactggggatgtattcctacaaaagcattattaaaatcggctcaggtttttgattat
ttaaaacacgcttctgattacggtttaacaataaatggcgaagttgataaagatttcaat
gccgttattgcacgttctcgtggtgttgctgaaggaatgagcaaaggtgttcaattttta
atgaaaaaaaataaaattgaagtaatagacggttttggtaaagtaaaacctggcaaaaaa
gtagatgtaaccgataaagatggtaaagtaacagaaatttcggcagaacatatcattatt
gcaacaggtgcacgctctcgtgaattacctaacttaccacaagacggtaagaaagtaatt
ggttaccgccaagcaatgactttacctacacaacctaaaaaaatgattgtagttggttca
ggtgcaattggtgtagaatttgctcatttttacaattctatgggtaccgaagttactatt
gttgaatttatgccaaacattgtacctgttgaagatgaagatgtgtcaaaacaatttgaa
cgttcattgaaaaaagcaggtatcaacattatgactaattcatctgttgaaaaagttgat
actacaggtgaaggtgtaaaagcaactgtaaaaacagcaaaaggcgaagaagttttagaa
gcagatatcttactttctgcagttggaatcaaatcaaacattgaaaacattggtttagaa
gaagttggtattgcaacagacagagataaaattttagtaaacgatttttaccaaacaaac
ataccggggtattatgcgattggcgatgtagttccagggcaagctttggcacacgttgca
tcggcagaaggaatcttatgtgttgaaaaattagctggtttacatgttgaacctttagat
tacggtaatattccaggttgtacgtatgctataccagaaattgcatcggttggtttaaca
gagaaagcagctaaagaaaaaggatacgaaattaaagtaggtaaatttcctttctctgca
tcaggtaaagctaaagctgcaggtacacctgatggttttgtaaaagtaatttttgatgct
aaatacggtgagtggttaggctgccatatgattggtgctggcgttactgatatgattgcg
gaagcagttgttgcccgtaaattagaaactactggtcatgaaattttaaaagcagttcac
ccacaccctactatgagtgaagcggttatggaagctgttgctgctgcttatgacgaagta
attcacttataa
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