Myroides sp. JBRI-B21084: P3875_07705
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Entry
P3875_07705 CDS
T09249
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mcla
Myroides sp. JBRI-B21084
Pathway
mcla03030
DNA replication
mcla03430
Mismatch repair
mcla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P3875_07705 (holA)
03430 Mismatch repair
P3875_07705 (holA)
03440 Homologous recombination
P3875_07705 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcla03032
]
P3875_07705 (holA)
03400 DNA repair and recombination proteins [BR:
mcla03400
]
P3875_07705 (holA)
Enzymes [BR:
mcla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P3875_07705 (holA)
DNA replication proteins [BR:
mcla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P3875_07705 (holA)
DNA repair and recombination proteins [BR:
mcla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P3875_07705 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
EXOC6_Sec15_N
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WKW45669
LinkDB
All DBs
Position
1586797..1587816
Genome browser
AA seq
339 aa
AA seq
DB search
MNELKKIIAAVKNKSLKPIYFLMGDEPYYIDLLSDYFIKNVISEEEKSFNEIVLYGKDVT
PMDVISQARQFPFMGDKMLVVIKEAQEMHKTIDQFTDYLKAIQTSTVLVICFKYKSLDKR
KELYKALSKNENVEIFESLKVKDYQLDNWIKTYVNDIGLEIEPKASAMLAEFLGNDLSKI
VNEIGKIQIVLKENKKITSQLIEQNIGISKDYNNFELIKAIVENNEAKAFKIGQYFALNS
KNNPLVVTIAVLYNFFSKLLQYHGIVYKNNAQNPNDIAKQMGVNPYALKDYQTASKFFAM
KKVSQNIAVIREIDLKGKGVNANLNHDDLLKELLIKIFR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactaaaaaaaataattgctgctgtaaaaaataaatcgcttaaacctatttat
tttttaatgggcgatgaaccttattatattgatttacttagtgattattttattaaaaat
gtaatttcggaagaagaaaaatcgtttaacgaaattgtattatacggcaaagatgtaacg
ccaatggatgttatttcgcaagcacgacaatttccgtttatgggcgataaaatgttggta
gtaattaaagaagcacaagaaatgcataaaactattgaccaatttacagattatttaaag
gcaatacaaacatctaccgttttagttatttgttttaaatacaaaagtttagacaagcga
aaagaactttacaaagctttatctaaaaacgaaaatgttgaaatttttgaaagtttaaaa
gttaaagattatcaattagataattggattaaaacgtatgttaacgatattggtttagag
attgaacctaaagcaagcgctatgttagccgaatttttaggaaacgatttaagtaaaatt
gttaacgaaattggtaaaattcaaattgttttaaaagaaaataaaaagataacgtcgcaa
ttaattgaacaaaatattggtattagtaaagattacaataattttgaattaattaaggca
attgtagaaaataacgaagctaaagcgtttaaaattgggcaatattttgcattaaattca
aaaaacaatccgttagttgtaacaattgcagtactttacaattttttttcaaagctgttg
caataccacggcattgtatataaaaacaatgcacaaaacccaaatgatattgccaagcaa
atgggtgtaaacccttatgcattaaaagattatcaaacagcaagcaaattttttgctatg
aaaaaagtaagtcaaaatattgcagttatccgtgaaattgatttaaaaggaaaaggcgta
aatgcaaatttaaatcacgacgatttattaaaagaattacttataaaaatatttagataa
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