Myroides sp. JBRI-B21084: P3875_07870
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Entry
P3875_07870 CDS
T09249
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcla
Myroides sp. JBRI-B21084
Pathway
mcla03420
Nucleotide excision repair
mcla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P3875_07870
03430 Mismatch repair
P3875_07870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcla03400
]
P3875_07870
Enzymes [BR:
mcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P3875_07870
DNA repair and recombination proteins [BR:
mcla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P3875_07870
MMR (mismatch excision repair)
Other MMR factors
P3875_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
DEAD
AAA_11
nSTAND3
AAA
Motif
Other DBs
NCBI-ProteinID:
WKW45701
LinkDB
All DBs
Position
complement(1615002..1617338)
Genome browser
AA seq
778 aa
AA seq
DB search
MQQYIDQLNEAQRAPVLQKNGAMIIIAGAGSGKTRVLTLRIAYLMHLGVDAFNILALTFT
NKAAREMKERISKIVGSAEAKNLWMGTFHSVFARILRAEADKLGYPSNFTIYDSQDSQRL
IGQIIKEMQLDKDIYKPNQVLSRISNYKNNMITVKAYFNNPELMEADAMAKKPRIGDIYQ
AYVERCFKAGAMDFDDLLLKTNELLIRFPEVLLKYQDRFRYILVDEYQDTNNSQYLIVKA
LADRFQNICVVGDDAQSIYAFRGANINNIFNFQKDFDNVQTYRLEQNYRSSKNIVEAANT
VIDKNKTKLDKVVWTENADGSKIKVHRSITDAEEGRFVASTIFEEKMLHQMNNGDFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLGYLRLIINPKDEEALVRVINYP
TRGIGNTTVEKLNVAANHYKRSIFEVMEHIDKIDLKLTAGTKSKISDFVTMIKNFQVINQ
NNDAYYLTDYVVKKTGLVQELKKDGTPEGITRLDNIEELLNGIKDFTEGQKEVDGARGSL
AEFLEDVALASDLDNDKGDDDRVALMTIHLAKGLEFPTVFVVGMEEDLFPSAMSVNSRAE
LEEERRLFYVALTRAEHKAYLTYAQSRYRWGKLVDCDPSRFIQEIDPQYIEFLSAPETNY
RYKSTINDDIFGDVDKSKLRLNKPKTGIPPKWVTENEAPKPNHDIRRLKDLNKISASNAT
SNENISLKEGQIIMHERFGKGKILNLEGAGADKKAEIHFETGGIKKLLLRFAKLNVLE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaatatatcgatcaattaaacgaagcgcaacgggcacctgtattgcaaaaaaac
ggtgcaatgattataattgctggtgccggatcgggtaaaacacgagttttaaccttacgc
attgcttatttaatgcatttaggggttgatgcttttaacattttagcattaacgtttacc
aacaaagccgcacgcgaaatgaaggagcgtatttctaaaattgttggttcagccgaagct
aaaaacttatggatgggtacatttcactcagtttttgctcgtattttacgtgccgaagct
gataaattagggtatccttcaaattttactatttacgattcgcaagattcacaacgttta
ataggtcaaattattaaagaaatgcagttagataaagatatttataaaccaaaccaggtt
ttaagcagaatatctaactataaaaacaacatgattactgttaaagcatactttaacaat
cccgagttaatggaagcagatgccatggcaaaaaaaccacgtattggcgatatttatcag
gcatatgtagagcgttgttttaaagcaggtgcaatggattttgatgatttattgttgaaa
accaacgaattacttattcgttttcctgaggttttattaaagtaccaagatcgttttaga
tatattttggtagatgagtaccaagataccaacaattcacaatatttaattgttaaagca
cttgcagatcgttttcagaatatttgtgtggtaggtgatgatgcacagtcaatttacgca
tttcgtggagcgaacattaacaatatctttaattttcagaaagattttgataatgttcaa
acctatcgtttagagcaaaattatcgttcatcaaaaaacatagttgaagccgcaaataca
gttatcgataaaaataaaacgaagttagataaagttgtttggaccgaaaatgccgatggt
tctaaaataaaagtacatcgttctattaccgatgctgaagaaggacgttttgtagcatca
accatttttgaggagaagatgttacaccaaatgaataacggcgattttgctattttatac
agaaccaatgcacaatcacgtgctatggaagatgctttacgtaaaaaagatattccgtac
cgtatttatggtggtttatcgttttaccaacgcaaagaaattaaagatgttttaggttat
ttacgcttaattatcaacccaaaagatgaagaagcgttggtgcgtgtaattaattaccca
actcgcggaattggaaatactacggtagaaaaactaaatgtggcggcaaatcactacaaa
agaagcatttttgaagtgatggagcatattgataaaatcgacttaaaacttaccgcaggc
accaaaagtaaaataagtgattttgtaaccatgattaaaaactttcaggtgataaatcaa
aacaacgatgcctattacttaaccgattatgtagttaaaaaaacggggttggtacaagag
ttaaaaaaggacggtacacccgaaggcataactcgtttagataatattgaagaactttta
aacggtataaaagattttacagaaggtcaaaaagaagttgatggcgcacgtggaagttta
gccgaatttttagaagatgttgccctagcaagcgatttagataacgataaaggcgatgat
gaccgcgtggctttaatgacgatacatttggccaaaggattagaatttccaacggttttt
gtggtgggaatggaagaagatttgtttccaagtgctatgagtgtgaattcacgtgccgaa
ttagaagaagaacgccgattgttttatgtagccttaacacgtgccgaacataaagcatat
ttaacatatgcacaaagcagatatcgttggggtaaattggtagattgtgatccatcgcga
tttatacaagaaattgatccacagtatattgagtttttatcggcaccagaaactaattac
aggtataaatctaccattaacgatgatatttttggcgatgtggataagtctaaattacgt
ttaaataaacccaaaactggtattccacccaaatgggtaaccgaaaatgaagctccaaaa
ccaaatcatgatatcagaagattaaaagatttaaataagatttcagcatcaaatgcaact
tcaaacgaaaatatatcattaaaagaaggacaaataattatgcacgaacgttttggtaaa
ggaaaaattcttaacttagaaggtgcaggagccgataaaaaagccgaaattcactttgaa
acaggcggaattaaaaagctattactgcgttttgcaaaacttaatgtattagaataa
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