Myroides sp. JBRI-B21084: P3875_10385
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Entry
P3875_10385 CDS
T09249
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mcla
Myroides sp. JBRI-B21084
Pathway
mcla03410
Base excision repair
mcla03430
Mismatch repair
mcla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3875_10385 (recJ)
03430 Mismatch repair
P3875_10385 (recJ)
03440 Homologous recombination
P3875_10385 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcla03400
]
P3875_10385 (recJ)
DNA repair and recombination proteins [BR:
mcla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P3875_10385 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P3875_10385 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P3875_10385 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
Tox-PL-2
Toprim
MmeI_C
Motif
Other DBs
NCBI-ProteinID:
WKW46180
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All DBs
Position
2160118..2161812
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AA seq
564 aa
AA seq
DB search
MRWSLKQDCDIQAVHQLKKTLNVTTLIATLLVQRGVKNYNDAKKFFRPQLADLYDPYLMK
DMQKAVKRIENAIENKERILVFGDYDVDGTTAVSLMSAYLKSFYKDVDTYIPDRYLEGYG
ISTQGIEYAHDNEITLIIALDCGIKSIDKIEYANQKGIDFIICDHHLPGDEIPNAVAVLD
PKQTDCNYPFKELCGCGVGFKLIQALAANKGETIEDLIPYLDLVATAIAADIVPIVDENR
ILAFYGLQVINQNPRPGILAMKKQFAISEFTITDVVFKIAPRINAAGRIKHGNYAVKLLT
EFNFNEAIECAKEIDTFNQERRVFDQQITQEALQQIIDNKEENNFSSVVYNNNWHKGVIG
IVASRLIETYYRPTLVFTKSGDYLAASARSVKGFDVYQALEKCSEHIIQFGGHMYAAGLT
IHPSAYQNFKQKFEEVVKESITTEQKTEEIEIDAVVNFDEFDKKTLRILKQFEPHGPGNM
TPVFFTPHAFDTGNAQTLGKENEHLRMFVKQNQSQAFQAIAFNKGEMLNKIKNLKPFNLV
YSLTENQWKDKVFVQLHVKDIKTI
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggtcgttaaaacaagattgtgatatacaggctgttcatcaacttaaaaaaact
ttaaatgttactacattaatagcaactttattggtgcaacgcggtgtaaaaaactataac
gatgcaaaaaagttctttcgtccacaacttgccgatttgtacgatccgtatttaatgaaa
gacatgcaaaaagctgttaagcgtattgaaaatgctattgaaaataaagaacgaatttta
gtttttggcgattacgacgttgatggaaccacagctgtatcgttaatgtcggcctattta
aaaagtttttataaagatgttgatacgtatatacccgatagatatttagaaggttacgga
atatcaacccaaggcatagaatatgcgcatgataatgaaatcacgctaattatagcatta
gattgcggtattaaatcgatagataaaattgaatatgccaaccaaaaaggtattgatttt
ataatttgcgatcaccatttgccaggcgatgaaataccaaatgctgttgccgttttagac
ccgaaacaaaccgattgcaactacccttttaaagaactttgtggttgtggtgtaggtttt
aaattgatacaagctttagcggctaacaaaggtgaaactatagaagatttaataccttac
ttagatttagttgcaactgctatagctgccgatattgtgcctattgttgatgaaaaccga
attttggcattttatggtttacaagtaattaaccaaaatccacgcccaggcattttagcc
atgaaaaagcaatttgctatttcagaatttacaattaccgatgtagtttttaaaattgct
ccacgtattaatgcggcgggcagaattaaacacggtaattatgccgttaaattattaact
gaatttaatttcaatgaagcaatagaatgcgctaaagaaattgatacttttaaccaagaa
cgcagagtttttgatcagcaaattacacaagaagcccttcagcaaattattgataataaa
gaagaaaataatttctcatcggttgtgtataacaacaattggcataaaggtgtaattggt
attgttgcatcgcgtttaattgaaacatattaccgcccaacgttggtttttacaaaaagt
ggagattatttagcagcatcagcaaggtcggtaaaaggttttgatgtgtatcaagcactt
gaaaaatgtagtgaacatatcattcaatttggtggtcacatgtacgctgcaggcttaacc
attcacccttcggcttaccaaaattttaaacaaaaatttgaagaagtggtgaaagaaagc
attacaacggaacaaaaaaccgaagaaattgaaattgatgccgttgtaaattttgatgaa
tttgataaaaaaacactacgcattttaaaacaatttgaaccacatggcccagggaatatg
actccggttttttttacacctcatgcttttgatactggcaatgcacaaactcttggtaaa
gaaaatgaacatttacgcatgtttgttaagcaaaatcaatcacaagcttttcaggcaatt
gcttttaataaaggcgaaatgcttaacaaaataaaaaatttaaaaccttttaatttggtg
tattcgttaactgaaaatcaatggaaagataaagtgtttgtgcaattacacgtaaaagac
attaaaaccatttaa
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