Myroides sp. JBRI-B21084: P3875_11480
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Entry
P3875_11480 CDS
T09249
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
mcla
Myroides sp. JBRI-B21084
Pathway
mcla00260
Glycine, serine and threonine metabolism
mcla00630
Glyoxylate and dicarboxylate metabolism
mcla00670
One carbon pool by folate
mcla00785
Lipoic acid metabolism
mcla01100
Metabolic pathways
mcla01110
Biosynthesis of secondary metabolites
mcla01200
Carbon metabolism
Module
mcla_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mcla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
P3875_11480 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
P3875_11480 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
P3875_11480 (gcvP)
00670 One carbon pool by folate
P3875_11480 (gcvP)
Enzymes [BR:
mcla01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
P3875_11480 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WKW46379
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Position
2395953..2398802
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AA seq
949 aa
AA seq
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MKTNAFALRHIGPRATDLQHMFNTVGVKDMDQLLYETFPDKIRLEKDIVLDPAMTEYDYL
AHATALGAENKVFKSMIGLGYNEAIVPAVIQRNIFENPGWYTAYTPYQAEIAQGRLEALL
NFQTTVIELSGMEIANASLLDESTAAAEAMALLFDVRTRDQKKNNANKLFVSEEILPQTL
SVLLTRSTPIGIEVVVGNHETFGFSDDFFAAILQYPGKYGQVHNYEDFINQAHSKDIKVA
VAADILSLARLKSPGEMGADVVVGSTQRFGIPLGFGGPHAGFFATKEEYKRSMPGRIIGV
SQDTNGNRALRMALQTREQHIKREKATSNICTAQVLLAVMAGMYAVYHGPQGLRRIANET
HAKAVTIENELTKLGFEQVNNAYFDTILVKADAAKVKAVAEAKEFNFYYVDANTVSISVN
ETISFNDINTVVGIFAEVAGKSFETVTELSQEALVPVSLERTSTFLEHDVFNTYHSESQL
MRYIKKLERKDLALNHSMISLGSCTMKLNAAAEMLPLSNPNWNNIHPFAPAEQTQGYLKM
LHKLEQQLNVITGFAGTTLQPNSGAQGEYAGLMVIRAYHESRGEGHRNIALIPASAHGTN
PASAAMAGMKVVVTKTTEEGNIDVEDLRAKAELHKDNLSCVMITYPSTHGVYESSIIEIT
NLIHENGGQVYMDGANMNAQVGLTNPARIGADVCHLNLHKTFAIPHGGGGPGVGPICVAQ
HLVEFLPTNPVIKVGGDNAITAISAAPYGSALVCLISYGYICMLGADGLKQSTMTAILNA
NYMKARLQEGYEVLYSGECGRAAHEMIIDCRMFKAKGIEVTDIAKRLMDYGFHAPTVSFP
VAGTLMIEPTESEDLAELDRFCDAMLSIRKEIEAVTAEDSNNVLKNAPHTLAMLTAQTWE
LPYSREKAAYPLEYVAENKFWPSVRRVDDAYGDRNLVCSCAPIEAYMEA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaatgcttttgctttgagacacattggccccagagcaaccgacttacaacac
atgtttaacaccgtgggtgtaaaagatatggatcaattgttatatgaaacatttccagac
aaaattcgtttagaaaaagatatcgttttagatccagctatgacagaatacgattattta
gcacatgcaacagcattaggtgccgaaaataaagtatttaaatctatgattggtttagga
tataacgaagcaattgttccggctgtaattcaaagaaatattttcgaaaatccaggctgg
tacacagcttatactccttatcaggcagaaattgcacaaggtcgtttagaagctttatta
aactttcaaactacggtaattgaattatcgggtatggaaattgctaacgcttcgttgtta
gacgagtctacagctgctgccgaagcaatggctttattgttcgatgttcgtacaagagat
caaaaaaagaacaatgccaataaattatttgtttctgaagaaattttacctcaaacactt
tcggttttattaacacgatctactccaattggtattgaagttgttgttggtaaccacgaa
acatttggtttttctgatgatttcttcgctgctattttacaatatccaggtaaatatggg
caagttcataactacgaagattttattaaccaagcacactcaaaagatattaaagttgca
gtagctgccgatattttatcgttagctcgtttaaaatcaccgggcgaaatgggtgccgat
gttgtagttggtagcacacaacgttttggtattccgttaggttttggtggtccacacgct
ggtttcttcgcaactaaagaagaatataaacgttctatgccagggcgtatcattggtgtt
tcacaagatacaaacggcaaccgtgcgttgcgtatggctttacaaacacgtgagcaacat
attaaacgcgaaaaagcaacttcaaacatttgtacagcgcaagttttattagcagttatg
gctggtatgtatgctgtttatcacggtccgcaaggtttacgtcgtattgcaaacgaaacg
cacgctaaagcagttactattgaaaacgaattaacaaaattaggttttgagcaagtaaat
aatgcttattttgataccattttggttaaagccgacgctgctaaagtaaaagctgttgcc
gaagctaaagaatttaacttttattacgttgatgcaaatacagtatcaatttctgtaaac
gaaacaatttcttttaacgatatcaatacagtagttggtatttttgctgaggttgcaggt
aaatcttttgaaacagtaaccgaattatcgcaagaagcattagttcctgtaagtttagaa
cgtacatctacctttttagaacatgatgttttcaatacgtatcattcagaatcgcaatta
atgcgttacattaaaaagttagagcgtaaagatttagctttaaaccactctatgatttcg
ttaggttcttgtaccatgaaattaaacgcagcagcagaaatgttgccgttaagtaaccct
aattggaataatattcacccatttgcaccagcagaacaaacccaagggtatttaaaaatg
ttgcataagttagagcagcaattaaatgtaattacaggttttgcaggtactaccttacaa
ccaaactcgggcgcgcaaggtgaatatgctggtttaatggttatacgtgcgtatcatgaa
tcacgtggcgaaggtcatagaaatattgctttaattcctgcatcggcacacggtacaaat
cctgcatcggctgcaatggctggtatgaaagtagttgttactaaaactaccgaagaaggt
aatattgatgttgaagatttacgtgcaaaagcagaattacacaaagataatttatcatgt
gtaatgattacttacccatcaactcacggggtgtacgaatcatctattatcgaaatcaca
aacttaatccacgaaaacggtggacaagtatatatggacggtgctaacatgaacgcacaa
gttggtttaacaaacccagcacgtattggtgccgatgtttgtcacttaaacttacacaaa
acttttgcaattccacatggtggtggtggtccaggtgttggtccaatttgtgtggcgcaa
catttagtagaatttttaccaacaaaccctgtaattaaagtaggtggagataacgctatt
acagctatttcggcagcaccttatggttcggcattggtttgtttaatttcgtacggatac
atttgtatgttgggtgccgatggtttaaaacaatctaccatgacagctattttaaacgca
aactatatgaaagcgcgtttacaagaagggtatgaagtgttatactctggtgaatgtggt
cgtgcagcacacgaaatgattattgattgccgtatgtttaaagcaaaaggtattgaagtt
accgatattgcaaaacgtttaatggactacggtttccatgcacctacggtatcgttccca
gttgcaggtacgttaatgattgaaccaaccgaaagtgaagatttagcagaattagatcgt
ttttgcgatgcaatgctatcaattcgtaaagaaattgaagctgttactgctgaagattcg
aacaatgtgcttaaaaatgcaccacatactttggctatgttaactgcacaaacttgggaa
ttaccttattctcgtgaaaaagcagcttatccgttagagtatgttgcagaaaacaaattc
tggccaagtgtacgtcgtgttgatgatgcatatggtgatagaaaccttgtttgttcttgt
gcacctattgaagcgtatatggaagcataa
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