Microbacterium sp. Clip185: PQV94_06785
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Entry
PQV94_06785 CDS
T11497
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mcli Microbacterium sp. Clip185
Pathway
mcli03030
DNA replication
mcli03430
Mismatch repair
mcli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQV94_06785 (holA)
03430 Mismatch repair
PQV94_06785 (holA)
03440 Homologous recombination
PQV94_06785 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcli03032
]
PQV94_06785 (holA)
03400 DNA repair and recombination proteins [BR:
mcli03400
]
PQV94_06785 (holA)
Enzymes [BR:
mcli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQV94_06785 (holA)
DNA replication proteins [BR:
mcli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQV94_06785 (holA)
DNA repair and recombination proteins [BR:
mcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQV94_06785 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WDG19440
LinkDB
All DBs
Position
1416102..1417127
Genome browser
AA seq
341 aa
AA seq
DB search
MATRKPTPTRSAIPQQSWRTPEPAPIVLISGPEEVCAERATARLRDYLRAEDPSLEISDI
DASDYTAGTLLAVSAPSLFGEPRLVRIRSVEKCSDAFLAEALAYLENPQEGATVVLRHTG
ASVRGKKLLEAIRSGSGGGVEVACPAIKRDSDRYDFAASEFREAGRRIAPAALRALVGAF
SDDLTELAAACQQLVNDVEGDITEQIVERYYGGRVETSAFTVADTAIAGRYGEALLALRQ
ALDSGADPVPMVAAIAMKLRTMARVAGTREPSRQLATRLGMKDWQVDRARRDLSGWTQDS
LGLAIQATARADAEVKGASRDAVFALERLVTVIATRAPYAS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgaaagcccaccccgacgcgcagcgccatcccgcagcagtcatggcggacc
ccggaaccggcgccgatcgtcctgatctccggccccgaggaggtctgcgcggagcgggcg
accgcgaggctccgcgactaccttcgcgccgaagacccgagcctcgagatctccgacatc
gacgcctccgactacacggcgggcacgctcctggccgtcagtgcgccgtcgttgttcggg
gagccgcggttggtgcgcatccggagtgtcgagaagtgctcggatgccttcctggcggag
gccctggcctacctcgagaacccgcaggagggggcgacggtcgtgctgcgccacaccggc
gcgagcgtgcggggtaagaagcttctggaagcgatccggtcaggatccggcggcggcgtc
gaggttgcgtgccccgccatcaagcgtgactccgaccgatacgacttcgcggcgagcgag
ttccgggaggcggggcggcgcatcgcgcccgccgcgctgcgcgcgctcgtcggggcgttc
tccgacgacctgaccgaactcgccgcagcctgtcagcagctggtgaacgacgtcgagggc
gacatcaccgagcagatcgtcgagcggtactacggcggtcgggtcgagacctcggccttc
actgtggccgacacggccatcgccggccgctatggagaggcgcttctggcgctgcggcag
gcgctcgactcgggcgccgatccggttccgatggtcgcggccatcgcgatgaagctgcgc
acgatggcccgcgtggccggcacgcgggagccgtcccgacagctcgcgacgcgactgggc
atgaaggactggcaggtcgatcgtgcacgtcgagacctgtcggggtggacccaggattcg
ctcggtctcgcgatacaggccaccgcccgcgccgacgcggaggtgaagggcgcctcccgt
gatgccgtgttcgccctcgaacgcctcgtcacggtgatcgccacgcgcgccccctacgcg
tcctga
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