Microbacterium sp. Clip185: PQV94_07935
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Entry
PQV94_07935 CDS
T11497
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mcli Microbacterium sp. Clip185
Pathway
mcli03030
DNA replication
mcli03430
Mismatch repair
mcli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQV94_07935
03430 Mismatch repair
PQV94_07935
03440 Homologous recombination
PQV94_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcli03032
]
PQV94_07935
03400 DNA repair and recombination proteins [BR:
mcli03400
]
PQV94_07935
Enzymes [BR:
mcli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQV94_07935
DNA replication proteins [BR:
mcli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQV94_07935
DNA repair and recombination proteins [BR:
mcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQV94_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WDG19650
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All DBs
Position
1648162..1648926
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AA seq
254 aa
AA seq
DB search
MPDHPVAARAPEALFDLEEFLTPRPPEWVRRIGVFDLETTGIDVTRDRIVTAHVGVLDET
GTVIEARSWLADPGVEIPHAAQAVHGISTAHARAHGRPAGEVVAEVSAALSELFASGTPV
VAYNAPYDFSLLRHEAVRHAVAPIEHPSPVIDPLVLDKAFDTYRRGKRTLSVVAEHYRVV
LEDAHEAAADAVAAGRLALALCERYGDRLPAAVAELHTNQIGWARSQAESLTEYFVRIGR
IDPLDPVDGRWPIR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccaccccgtcgccgcccgcgctcccgaagcgctcttcgacctcgaggagttc
ctgacaccacgtcctcccgagtgggtcaggcgcatcggcgtcttcgacctcgagacgacc
ggaatcgatgtgacccgcgaccgtatcgtgaccgctcacgtcggcgtgctggacgagacc
ggcaccgtgatcgaagcgcgctcgtggctcgcggatcccggagtcgagatcccgcacgcc
gcgcaggccgtgcacggaatctccaccgcgcacgcccgagcccatgggcgtccggctgga
gaggtcgtcgccgaggtgtccgccgcgctgtccgagctcttcgcatcgggcacgccggtc
gtcgcctacaacgccccgtacgatttctcgctcctgcggcacgaggccgtgcgtcacgcg
gtggcaccgatcgaacacccgtcccccgtgatcgatccgttggtgctcgacaaggcgttc
gacacgtatcgtcgcggcaagcggacgctgagcgtggtcgccgagcactatcgcgtcgtc
ctcgaggacgctcacgaagccgcagcggacgcggtagccgcgggaaggctcgcgctcgcc
ctctgcgaacgctacggcgatcgactgcccgctgccgtcgcggagcttcacacgaaccag
atcggatgggcgaggtctcaggcggagagtctcaccgagtacttcgtccgtatcggccgc
atcgacccgctcgatcccgtcgacggtcgctggccaatccggtga
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