Microbacterium sp. Clip185: PQV94_11280
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Entry
PQV94_11280 CDS
T11497
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mcli Microbacterium sp. Clip185
Pathway
mcli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQV94_11280 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcli03019
]
PQV94_11280 (groL)
03110 Chaperones and folding catalysts [BR:
mcli03110
]
PQV94_11280 (groL)
03029 Mitochondrial biogenesis [BR:
mcli03029
]
PQV94_11280 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcli04147
]
PQV94_11280 (groL)
Enzymes [BR:
mcli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PQV94_11280 (groL)
Messenger RNA biogenesis [BR:
mcli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PQV94_11280 (groL)
Chaperones and folding catalysts [BR:
mcli03110
]
Heat shock proteins
HSP60 / Chaperonin
PQV94_11280 (groL)
Mitochondrial biogenesis [BR:
mcli03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PQV94_11280 (groL)
Exosome [BR:
mcli04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PQV94_11280 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PQV94_11280 (groL)
Exosomal proteins of breast cancer cells
PQV94_11280 (groL)
Exosomal proteins of colorectal cancer cells
PQV94_11280 (groL)
Exosomal proteins of bladder cancer cells
PQV94_11280 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
WDG17205
LinkDB
All DBs
Position
complement(2318285..2319904)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKKGIE
KAVAAVTEALLADAKEIESKEQIAATASISAADPAIGELIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLNPYFVTDPERQEAVFEDPYILIANQKISNIKDLLPIVDKVIQ
DGKELLIIAEDVEGEALATLVLNKIRGIFKSAAVKAPGFGDRRKAQLQDIAILTGGQVIT
EEVGLKLENATLDLLGRARKVIITKDETTIVEGAGDSAQIEGRVTQIRREIDNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGVVAGGGVALIQA
GKTAFQGLTLSGDEATGANIVRVAIEAPLKQIALNAGLEPGVVANKVADLPVGHGLNAAT
GEYGDLFAQGIIDPAKVTRSALQNAASIAGLFLTTEAVVADKPEKAAAAPADPSGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcatcgctttcgatgaggaggcccgtcgtggcctcgagcgcggcctgaac
atcctggccgacgccgtcaaggtgaccctgggtccccgtggccgcaacgtcgtcctcgag
aagaagtggggcgcacccacgatcacgaacgacggtgtctccatcgccaaggagatcgag
ctcgacgacccgtacgagaagatcggcgcggagctcgtcaaggaggtcgcgaagaagacc
gatgacgtcgccggtgacggaaccacgacggcaacggtcctcgcacaggcgctcgtgcgc
gaggggctgcgcaacgtcgccgccggtgccgaccccatctcgctcaagaagggcatcgag
aaggctgtcgccgcggtgaccgaggcgctgctggccgacgccaaggagatcgagtccaag
gagcagatcgccgccaccgcgtcgatctccgccgctgaccccgcgatcggtgagctcatc
gccgaggcgatcgacaaggtcggcaaggagggcgtggtcaccgtcgaggagtccaacacc
ttcggcaccgagctcgagctcaccgagggtatgcgcttcgacaagggctacctgaacccc
tacttcgtgaccgacccggagcgtcaggaagcggtcttcgaagacccctacatcctgatc
gccaaccagaagatctcgaacatcaaggatctcctgccgatcgtcgacaaggtgatccag
gacggcaaggagctcctcatcatcgccgaggacgtcgagggcgaagctctcgcgaccctg
gtgctgaacaagatccgcggcatcttcaagtcggccgccgtcaaggctcccggcttcggc
gaccgccgcaaggcccagctgcaggacatcgcgatcctcacgggtggacaggtcatcacc
gaggaggtcggtctcaagctcgagaacgccaccctcgacctgctcggccgtgcccgcaag
gtcatcatcaccaaggatgagaccacgatcgtcgagggtgccggcgactccgctcagatc
gagggtcgcgtgacccagatccgtcgcgagatcgacaacacggacagcgactacgaccgc
gagaagctccaggagcgcctcgccaagctcgccggcggcgtcgccgtcatcaaggcgggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gccaaggcagcggtcgaggagggtgtggtcgccggtggtggcgtcgcgctcatccaggcc
ggcaagaccgcgttccagggtctgacgctgtcgggcgacgaggcgacgggtgcgaacatc
gtccgtgtcgccatcgaggctccgctgaagcagatcgccctcaacgccggtctcgagccc
ggtgtcgtcgccaacaaggtggcggacctgcccgtcggtcacggtctgaacgccgcgacc
ggtgagtacggcgacctcttcgcgcagggcatcatcgaccccgccaaggtcacccgctcg
gcgctgcagaacgccgcgtcgatcgccggtctgttcctgaccaccgaggccgtcgtcgcc
gacaagccggagaaggctgccgccgctcccgctgacccgtcgggcggcatggacttctga
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