Microbacterium sp. Clip185: PQV94_14960
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Entry
PQV94_14960 CDS
T11497
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcli Microbacterium sp. Clip185
Pathway
mcli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQV94_14960 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcli03019
]
PQV94_14960 (recQ)
03400 DNA repair and recombination proteins [BR:
mcli03400
]
PQV94_14960 (recQ)
Enzymes [BR:
mcli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQV94_14960 (recQ)
Messenger RNA biogenesis [BR:
mcli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQV94_14960 (recQ)
DNA repair and recombination proteins [BR:
mcli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQV94_14960 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WDG17905
LinkDB
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Position
complement(3063867..3065843)
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AA seq
658 aa
AA seq
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MSSPHPSSWDVPPDDWAPPEDEPPYDPYGESGPVPPDDGWVPPEDAPPAAPRRDFTGQDP
RAVLHEVYGYDAFRGDQADIVDHVVGGGDAIVLMPTGGGKSVTYQVPALVRPGTGLVVSP
LIALMHDQVEALLANGVRAAYLNSTQLPGERQSVERAFVAGEIDLLYVAPERLNLPTTTA
LLKRGRLSVIAIDEAHCVSQWGHDFRPDYLALGELGALFPGVPRMALTATATRATHREIT
ERLALGDARHFVASFDRPNIQYRIEPKVDPRRQLVSFIRSQPEGSAGIVYALSRKSVEQT
ADYLRAQGIDALPYHAGLPAETRAANQSRFLRDDGVVMVATIAFGMGIDKPDVRFVAHID
LPKSVEGYYQETGRAGRDGDPSVVWMAYGLGDVVQQRRLIDQSPGDRTFKIRMGQHLDAM
LALCETVECRRQNLLNYFGEQAEPCGNCDTCLTPPEIFDGLVPAQKLLSTVVRLQRERNQ
SFGAGQIIDILRGADTDRIRQQRHNELATYGIGADLSDQDWRSIIRQLLARGVLVARGEY
GTLALGEEAGGVLRGETAVRLRRDVIGRPASVPRARRAAASDAVAEGDRALFEALREWRA
QAAREQGVPAYIVFGDATLRALAEHRPGSLADLDGITGIGAKKRDAYGEAVLEVIAAA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgccgcatccgtcctcgtgggacgtcccaccggatgactgggcgcctcccgaa
gacgagccgccgtacgatccgtacggcgagagcggcccagttccgcccgacgacggctgg
gtcccgccggaggatgcgccgcccgccgcgccgcgccgagacttcaccggccaggacccg
cgggccgtgttgcacgaggtctacggctacgacgctttccggggcgaccaggccgacatc
gtcgatcatgtggtcggcggcggcgacgccatcgtgctcatgccgacgggcggcggaaag
agcgtcacctaccaggtgccggcgctcgtgcggcccggcacggggctcgtcgtcagtccg
ctcatcgccctcatgcacgaccaggtcgaagcgctcctggccaacggcgtgcgcgccgcc
tacctcaactccacgcagctgcccggagaacgtcagagcgtcgagcgtgcgttcgtcgcg
ggcgagatcgacctgctctacgtcgcgcccgaacggctcaacctccccaccaccacggcg
ctgttgaagcgcggccggctgagcgtgatcgcgatcgacgaagcgcactgcgtgtcgcag
tggggccatgacttccgccccgactacctcgccctcggcgagctgggcgcccttttcccc
ggcgtgccccggatggcgctgaccgccacggcgacgcgcgccacccaccgcgagatcacc
gagcggctggcgctcggcgatgcccgccacttcgtggcgagcttcgaccgacccaacatc
cagtaccgcatcgagcccaaggtcgatccgcgccgccagctcgtgtccttcatccgatca
cagccggagggctccgcgggcatcgtgtacgcgctgagccgcaagagcgtcgagcagacg
gccgactatctgcgtgcgcaggggatcgatgccctgccgtaccatgccggtctgccagca
gagacccgcgccgcgaaccagtcacggttcctgcgcgacgacggcgtcgtgatggtggcc
acgatcgccttcggcatgggcatcgacaagccggatgtgcgttttgtcgcgcacatcgat
ctcccgaagtccgtcgagggctactaccaggagaccgggcgcgccggccgtgacggcgat
ccctcggtcgtgtggatggcgtacgggctcggcgacgtcgtgcagcaacggcgactgatc
gaccagagccccggcgaccgcacgttcaagatccggatgggacagcacctcgacgccatg
ctggcgctgtgcgagaccgtcgagtgtcgacggcagaacctgctgaactacttcggcgaa
caggccgagccctgcggcaactgcgacacgtgcctcaccccgcccgagatcttcgacggc
ctcgtgccggcccagaagctcctgtcgacggtcgtgcgcctccagcgggagcgcaaccag
tccttcggcgcgggccagatcatcgacatcctgcgcggggcagacaccgaccgcatccgt
cagcaacggcacaacgagctggcgacgtacggaatcggcgccgacctgagtgaccaggac
tggcgcagcatcatccgccagctcctcgcacgcggcgtgctcgtcgcgcgcggtgagtac
ggcactctcgcactgggcgaggaagccggtggagtgctccggggcgagaccgcggtgcgc
ctccggcgtgacgtgatcggccgccccgccagcgtgccgcgcgcacggcgggcagccgca
tccgacgccgtggctgagggtgatcgcgcgctgttcgaggctctgcgtgagtggcgcgcc
caggccgcgcgcgagcaaggcgtccccgcgtacatcgtgttcggcgacgcgacgttgcgc
gcgctcgccgagcatcgtcctggctccctcgccgacctcgacggcatcacggggatcggg
gccaagaagcgcgacgcgtacggcgaggctgtgctcgaggtcatcgccgccgcctga
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