Metamycoplasma cloacale: DK849_01595
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Entry
DK849_01595 CDS
T06147
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mclo
Metamycoplasma cloacale
Pathway
mclo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mclo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DK849_01595 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mclo03021
]
DK849_01595 (rpoC)
03400 DNA repair and recombination proteins [BR:
mclo03400
]
DK849_01595 (rpoC)
Enzymes [BR:
mclo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DK849_01595 (rpoC)
Transcription machinery [BR:
mclo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DK849_01595 (rpoC)
DNA repair and recombination proteins [BR:
mclo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DK849_01595 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
YtxH
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AWX42761
UniProt:
A0A2Z4LLU8
LinkDB
All DBs
Position
367036..371424
Genome browser
AA seq
1462 aa
AA seq
DB search
MKKSGKYATLEEEKIAKISLVLATPEDVESWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPVCGHKYKKINEGSFCTKTELCKQEKVEILPKISRRNHMGHIKLNSPVVHFW
YFKVDHSIIYKLLGLKVGKNQEAVRRIDLENLIYYKSHIVLESGGLKSLQKNTIIDINDA
AMIYKDALEELLQRFEPDTEDYDDIKETLDDLVDKATSKIGQDYGIDFYELNDVIEHYSE
AKIGTGAKAIEYLLKNIDLQEEKKRVTEEIKKINDEEIKNGAKIASTAKQNREKLYKRLQ
VINAFIESKQKPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLKQW
QEKDAPTLVIQNELRMIQEAVDALIDNQRRTPNPVLSKDNRPFKSISDALTGKKGRFRQN
LLGKRVDYSGRSVIVVGPHLKMHQCGIPREMAAKLFEPWIISRLIEKEVATTIKNAKKMI
EDLNPVIWPHVADTIKGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIKLHPLVCTPFNADF
DGDQMAVHVPISEQALLESRELMLANKNILGPKDGEPIINPSQDMILGIYYLTIEEANAL
GEGRIFDNFDHMMRAYEAKKVSLHARVALPISGVKATNVKMFENPEDKPKYIISTVGKFI
FNSIFPKTFPFIYDNKVVKAKSLDEYVLGMDKYIVPAGTNILDYIKMELSIQEAFNKKNI
AKIIRYVFNKYVATISVEDLASVINKINDVSTSDIELEFFELNNHKGRKLDKEHAMILGS
FTVEEIKSLVSRTPERANGAQIPFSAEEKAEILDKVWFKYTNIVASILDEIKDLGFKYST
KSGISISITDILETDKKSEYIADGDKYIEQLKEYYNQGFITDDDRYTLTIKKWSEIKDSI
QAELQDIIKQNPSNPVITMINSGARGNISNYVQLAGMRGLMANNTKTTKADAKNDIVVRS
TVEVPVKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVREEN
CGSDYGYIARDIVDTKTKQIIVPLSERIVGRYTNKAIYNQNKELIAERNTLITEKIAQKI
IEAGFTEVEIRSILGCNTRNGVCKMCFGKDLATNRIVNIGEAVGIIAAQSIGEPGTQLTM
RTFHTGGVAGAEDITGGFTRLSELIDAHEQPWGQPATISPFKGVVEKIEIDEKNNTHHLV
TIATLDANNVLQHKKVFVETKKKLRVKEGDSVRIGQKLSEGPVILKRLLELTDTITVQNY
LLKEIQRIYRIQGIAISDKYIEIIIRQMMSKIVIHDPGDSKFFAGAIVDIFDYQEENASL
LTKGMKPAFGEVVIKGAKQVPLLSDSFLAAASYQETSKILVHAAISSRNDNLNGLKENII
IGKKIPAGTALFPFEKNSKYDIKPAIQYFKQETEEQEFDNFVPLDIEKFNQEIDEEWNET
MQEEVIEEEDSFDDDYNDDNDY
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatctggaaaatatgcaaccttagaagaagagaaaattgcaaaaatttcatta
gttcttgcaacacctgaggatgttgaaagttgatcacatggtgaagttactaaaccagaa
actattaactataaaagctacaaacctgaacgtggtggattatttgatgaaattattttt
ggtccaatgattgactaccgttgtccagtttgtggtcataaatataagaaaattaatgaa
ggtagtttctgtactaaaactgaactatgtaaacaagaaaaagtagaaattttacctaaa
atttcacgtcgtaatcacatgggacatattaaattaaatagtcctgttgtgcatttctga
tacttcaaagtcgatcactcaattatttataaattacttggtctaaaagttggtaaaaat
caagaagccgttagaagaattgatctggaaaacttaatttactataaaagtcatattgta
ttagaatcaggtggtttaaaatcattacaaaaaaataccatcattgatatcaatgatgct
gcaatgatttataaagacgctctagaggaattactacaacgttttgaaccggataccgaa
gattatgacgatattaaagaaacattagacgatcttgttgataaagctacatcaaaaatt
ggtcaagactacgggattgacttctatgaattaaacgatgttattgaacattattcagaa
gcaaaaattggtacaggtgccaaagcaattgaatatttattaaaaaacattgatttacaa
gaagaaaaaaaacgtgttactgaagagattaagaaaatcaacgatgaagaaatcaaaaac
ggagcaaaaattgcttcaactgcaaaacaaaatcgtgaaaaactttataaacgtcttcaa
gtaattaatgctttcattgaatcaaaacaaaagccaacaagtatgttgatctacaaccta
cctgttattccagctgatttacgtcctttaattcaactagacggaggacgtcactcaaca
tctgatataaacgaactatatcgtagagtaattatcagaaacaaccgtttaaaacaatga
caagaaaaagatgctcctactttagttatccaaaacgaattaagaatgattcaagaagca
gttgatgctttaattgataaccaaagaagaacaccaaaccctgttttatctaaagacaat
cgtccatttaaatcaatttcagacgctttaactggtaaaaaaggtcgtttcagacaaaac
ttattagggaaacgtgtcgattattcaggacgttctgttatcgttgttggaccgcattta
aaaatgcatcaatgtggtatacctagagaaatggctgctaaactatttgaaccatgaatt
atttcacgtttaatcgaaaaagaagtggctacaacaattaaaaatgctaagaaaatgatt
gaggatttaaacccagttatttgacctcatgttgctgatacaatcaaaggaagacttgta
ttattaaaccgtgcaccaacattacaccgtttatcaattcaagcttttgaaccagtatta
gttagaggaaaagcaattaaattacacccattggtatgtactccatttaacgctgacttc
gatggtgaccaaatggctgtccatgtccctatttcagaacaagctttattagaaagccgt
gaattaatgcttgctaataaaaacattctaggtcctaaggatggagaacctattattaac
ccttcacaagatatgattttaggtatttactatttaacaatagaagaagctaatgcatta
ggtgaaggaagaatttttgataatttcgatcatatgatgagagcatatgaagcgaaaaaa
gtttcattacacgcaagagttgcattacctatttctggagtaaaagcaacaaatgtaaaa
atgtttgaaaatccagaggataaaccaaaatatattatttcaactgttggtaaattcatt
tttaacagcattttcccaaaaacattcccattcatttatgacaataaagtcgttaaagct
aaatcattggatgaatatgttttaggtatggataaatatattgttccagctggtacaaat
attctagattacattaaaatggaactatcaattcaagaagcattcaacaagaaaaacatt
gctaaaattattcgttatgtatttaacaaatatgtagcaaccatttctgttgaagatctt
gcatcagtaattaataaaatcaatgatgtatcaacatctgatattgaacttgaattcttt
gaactaaacaaccacaaaggtcgcaagttagataaagaacatgcaatgattttaggttca
ttcactgttgaagaaattaaatcattagtttcacgtactccagaacgtgcaaacggcgca
caaattcctttttctgcagaagaaaaagctgaaattcttgacaaagtatgatttaaatac
actaacatcgtagcatcaatcctagatgaaattaaagatttaggattcaaatactcaact
aaatcaggtatttcaatctctattactgacattctagaaactgataaaaaatctgaatac
atcgcagatggagataaatacattgaacagttaaaagaatactacaatcaaggtttcatt
accgatgatgatagatatactttaactattaaaaaatgatctgaaattaaagactcaatt
caagctgaattacaagacattattaaacaaaacccatcaaacccagttattacaatgatt
aactcaggagcacggggcaatatctctaactatgttcaattagcaggtatgcggggatta
atggctaacaacaccaaaaccactaaagccgatgctaaaaacgatattgttgttcgttca
acagttgaagttcctgttaaatcttcattcattgaaggactaactgcatttgagttctat
tcatcaacccacggggctagaaagggactaaccgatactgccttgaacacagctaaatca
ggttatttaactcgtcgtttagtagacgtagcacaaaatatcgttgttcgtgaagaaaat
tgtggatctgactacggttacatcgcgcgtgatattgttgatacaaaaactaaacaaatt
atcgttcctttaagtgaaagaattgttggaagatacacaaataaagcaatttataatcaa
aataaagaattaattgccgaaagaaacacattaattacagaaaaaatcgcgcaaaaaatt
attgaagctggatttactgaagttgaaattagatcgattttaggatgcaacaccagaaac
ggtgtatgtaagatgtgttttggtaaagacctagcaactaacagaattgtaaacataggt
gaagcagttggtatcattgctgctcaatcaattggtgaacctggtactcaattaaccatg
cgtactttccatacaggaggggtagctggagctgaagatattacaggtggtttcactaga
ttaagtgaattaattgacgcacacgaacaaccatgaggtcaaccagcaactatttcacca
tttaaaggtgtggtagaaaaaattgaaattgatgaaaagaacaacactcatcatttagta
accattgctacattagatgcaaacaatgttttacaacacaaaaaagtatttgttgaaact
aagaagaaattaagagtaaaagaaggcgattctgtaagaattggtcaaaaactttcagaa
ggacctgtaattctaaaacgtctacttgaattaacagataccattactgttcaaaactat
ctattaaaagaaattcaaagaatctatcgtattcaagggattgcaatttctgataaatat
atcgaaattattattcgtcaaatgatgtctaagattgtaattcacgacccaggtgattct
aaattctttgccggagctattgttgatatctttgactatcaagaagaaaacgcaagtcta
ttaactaaaggtatgaaacctgcttttggtgaggtagtaattaaaggagcaaaacaagtt
ccattactatcagattcattcctagcagccgcttcatatcaagaaacaagcaagatttta
gttcatgcagcaatttcatcaagaaatgacaatttaaatggattgaaagaaaacattatc
attggtaagaaaattccagctggtactgctttattcccatttgaaaagaattcaaaatac
gacatcaaaccagcaattcaatacttcaaacaagaaactgaagagcaagaatttgataat
tttgttccattagacattgaaaaattcaatcaagaaattgatgaagaatgaaatgaaaca
atgcaagaggaagtaattgaagaagaagatagctttgatgacgattacaatgacgacaat
gattattaa
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