Mycoplasmopsis californica HAZ160_1: MCAL160_0669
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Entry
MCAL160_0669 CDS
T03651
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcm
Mycoplasmopsis californica HAZ160_1
Brite
KEGG Orthology (KO) [BR:
mcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcm03016
]
MCAL160_0669 (truB)
Enzymes [BR:
mcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MCAL160_0669 (truB)
Transfer RNA biogenesis [BR:
mcm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MCAL160_0669 (truB)
Prokaryotic type
MCAL160_0669 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
CATSPERB_1st
Motif
Other DBs
NCBI-ProteinID:
BAP01138
UniProt:
A0AAT9F8A0
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All DBs
Position
complement(508557..509399)
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AA seq
280 aa
AA seq
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MFYLLHKPKNISSFACIKKFARQMKIKKIGHSGTLDPLASGLLLLATDDDTKLLPYIKDK
TKTYKASIIFGQARSTYDEEGEITQTSENKINESDLNAVLEWFRTQNVQIPPIFSAKKIN
GTRAYDLARRKQEVQLKAQKIKIHEAQFISFNYQSQELVVKLKVSNGTYIRSLAHDIGQA
FNTCSYMSDLERTEISTLNNNLLVNNNFVAIINVLPLLSVASLMLSGDQIKVLQKGLLLP
IETTDGQYVITNQKNGTQVLGIIEVANSFARVVKLFGNRL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttactacacaaacctaaaaatatttcttcatttgcttgcattaaaaaattt
gctcgtcaaatgaaaattaaaaaaataggtcacagcggaacattagatccattggccagc
ggtcttcttctactcgctactgatgacgatacaaaacttttgccatatattaaggataaa
acaaaaacgtataaggctagcatcatttttggacaagctcgctcaacatatgatgaagag
ggagaaattacccagactagcgaaaataaaattaacgaaagcgatttaaacgctgtttta
gagtgatttagaacacaaaatgtccaaataccacctatttttagtgctaaaaaaattaat
ggtactcgtgcatacgatttagctcgccgtaagcaagaagttcaattaaaagctcaaaaa
ataaaaattcatgaagcacaatttatttcatttaactaccaatcccaagaattggtcgtt
aaacttaaagtctcaaatggcacctacattaggtcgctagcacatgatattggtcaagcg
ttcaatacatgctcatacatgagtgatttagaaagaactgaaatttccacattaaacaat
aatctattagtaaacaataattttgttgctataattaatgtcctgcctttactgagtgtt
gcttcattaatgttgagtggcgaccaaataaaagtcttgcaaaaaggacttttattgcca
attgagacaactgatgggcaatacgttatcactaaccaaaaaaacggcactcaggttcta
ggtattattgaggttgcgaatagttttgctcgtgtagttaaattatttggcaatcgatta
taa
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