Mycoplasmopsis californica HAZ160_1: MCAL160_0801
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Entry
MCAL160_0801 CDS
T03651
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mcm
Mycoplasmopsis californica HAZ160_1
Pathway
mcm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCAL160_0801 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcm03400
]
MCAL160_0801 (uvrB)
DNA repair and recombination proteins [BR:
mcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCAL160_0801 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MCAL160_0801 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
ResIII
UvrB
UVR
DEAD
AAA_22
AAA_30
nSTAND3
AAA_16
LpxD
RNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAP01209
UniProt:
A0AAT9F8K5
LinkDB
All DBs
Position
complement(617349..619337)
Genome browser
AA seq
662 aa
AA seq
DB search
MILSGYKLVSKYKPAGDQPKAIKELIRGVENGERFQVLKGVTGSGKTFTIANVIAHFDRP
VLVLSHNKTLASQLYSELKGFFPENNVEYFVSYFDYYRPEAYIPSSDSYIEKNSQRNKEI
EAMRMSTYNSVLTTKNTIVVASVSSIYGALDPSEYREQIFYIEVGQKWKRNDFLRELVQK
NYKRNETDLILGSFSSKGDVVFIRPAHTEEFVIRVVFWGDEIETINTCHPVTKAVFEQFK
RYRIFPGEAYTVSNDLTRQVVEKIEIELEERIKYFAKNNKLLEAQRIEERTRKDIDSLSE
FGTCPGIENYSRYFDRREADERPYTLLDYLKDQNPLLIIDESHMMLPQLRGMYNGDRSRK
QTLVDYGFRLPSALDNRPLRFEEFESSFDFQTIYISATPEEYELDKTHGVLTRLYVRPTG
LLDPIIEVRPSENQVEDIYDEIQKQKLKNERTLILTTTKRLTEELTRHYLAKNEKIAFLH
SEHNTFDRNRILLKLRKGVYDTVIGVNLLREGIDLPEVSLIVVLDADKEGFLRDTKSLIQ
IAGRAARNANGRVLMYAEKVSRSMEEAIADNQEKRALQVEYNRVHNIVPKTIVKDIADSL
LDDAKDEQISFFLNDNKAKAKDIKAKALLLEELRAKMNEAAQNLDYEKAIEIRDLIIELE
KQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgatattgtcaggttataaattagtttctaaatataaaccagccggagaccaaccaaag
gctattaaagagttaatacgaggtgttgaaaatggtgaaagatttcaggttttaaaaggg
gttactggttcaggaaagacatttacaattgctaatgtaattgctcactttgatcgtccg
gttttggtactttcacacaataaaacgttagcaagtcagttatacagcgaattaaaagga
ttttttcctgaaaataacgttgaatactttgtatcttattttgactattatcgaccagaa
gcttatataccgagctctgattcatacattgagaaaaattcgcaacgcaataaagaaatt
gaggcgatgcgaatgtcgacatataattctgttttaactacgaaaaatacaattgttgtg
gcttctgtatcatcgatttatggagcattagatcccagtgagtaccgcgagcaaattttt
tatatagaagttggtcaaaagtgaaaaagaaacgattttttgcgtgaacttgtgcaaaaa
aattacaaacgcaatgaaactgatcttattttaggttcttttagctcaaaaggcgatgta
gtatttattaggcctgctcacacagaggaatttgtgataagggtcgttttttgaggcgat
gaaattgaaacaataaacacctgccatcccgttacaaaggctgtttttgaacaatttaaa
cgatatagaattttccctggtgaagcatacacagtcagcaatgatttaactcgccaagtt
gttgaaaaaattgagattgagcttgaagagagaattaaatattttgctaaaaacaataaa
cttttagaggctcaaaggattgaagagcgtactcgcaaggatatagactcactaagtgag
tttggcacttgtcctggcattgaaaattattctcgttattttgaccgtcgggaagcggat
gaaagaccatatacacttttagattatctaaaagaccaaaatccattgctaattattgat
gaaagtcatatgatgttacctcaacttcgtgggatgtataacggagatcgcagtcgaaaa
caaacattagtagattatggatttagattgccgtctgcattagataatcgcccgcttaga
tttgaagaatttgaaagctcttttgattttcaaacaatttatatttccgcaactcctgag
gaatatgaacttgacaaaacacacggtgttttaactcgtttatacgtacgaccaacaggg
cttttagacccaattattgaagttaggccaagtgaaaatcaggttgaggatatttatgat
gaaattcaaaaacaaaaattgaaaaatgaacggacattgattttaacaacaacgaaaaga
ctgactgaggaactgacgcgccattacctagcaaaaaatgaaaaaattgcatttttacac
tcagaacacaatacttttgaccgcaatcgtatattgttaaagttgagaaaaggtgtttat
gatactgtaattggcgtcaatttactgcgggaaggaattgatttgcctgaggttagtttg
attgtagttttagatgctgataaagaaggttttttaagggatactaaatcacttattcag
attgcagggcgcgccgcaagaaatgcaaatgggcgagtgttgatgtatgcagaaaaggtc
tcgcggagcatggaagaagcaatcgcggataatcaagaaaaaagagcactacaggttgaa
tataatcgtgtgcataatattgtgcctaagacaattgtaaaagatattgcagatagtctt
ttggatgatgctaaagacgagcaaattagcttctttttgaatgataataaagctaaagca
aaggatatcaaagcaaaagcgctacttttagaagaattaagagcaaaaatgaacgaagct
gcccaaaatttagattacgaaaaagcgattgagataagagatttaattattgaattagaa
aagcaataa
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