Metallosphaera cuprina: Mcup_0033
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Entry
Mcup_0033 CDS
T01467
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
mcn
Metallosphaera cuprina
Pathway
mcn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mcup_0033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcn03021
]
Mcup_0033
Enzymes [BR:
mcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mcup_0033
Transcription machinery [BR:
mcn03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mcup_0033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
AEB94144
UniProt:
F4FXU6
LinkDB
All DBs
Position
28587..31961
Genome browser
AA seq
1124 aa
AA seq
DB search
MLTIDDRWAIVEAYFKSRGLVRQHLDSFNDFIKNKLQEIIDEQAEITTEIPGLKIRLGKI
RVGKPRVREADKGDKEITPMEARLRNLTYAAPVYLEMTPIENNIEGDLTEVYIGDIPIML
KSIADPTSEFTSEKLVEIGEDPKDPGGYFIVNGSERVIVTQEDLATNRVLTDVGKTGSNI
THTAKIISSTSGYRVPITIEKLKDSTIHVSFPAVPGKIPFAILMRALGIETDEEITLAVS
LDPDIQNELLPSIEQASSIISKDDALDFIGNRIAIGQKREMRIQKAEQVLDKYFLPHIGT
NASDRTAKAYYLAFAVSKLIELYLGRREPDDKDHYANKRLKLAGDLFASLFRVAFKAFVK
DLVFQLEKSKVRGRRLAVNALVRQDIISERIRHALATGNWVGGRTGVSQLLDRTNWLSML
SHLRRVVSSLARGQPNFEARDLHGTQWGRMCPFETPEGPNSGLVKNLALLGQISVGVNEK
SVERLLYNLGVIPIEEVIKKYRSQEEKSEDYENWSKVILNGRLIGYYPNGSELAEKIREK
RREGELSDEVNVNYTRTETYNEVYINSDSGRVRRPLIVVRHGKPLVTKEDIENLKKGKIT
FDTLIREGKIEFLDAEEEENAYIALEPKDVTKDHTHLEIWTPAILGITASIIPYPEHNQS
PRNTYQSAMAKQALGLYAANYQIRTDTRAHLLHYPQKPIVQTRALEAIGYTERPAGNNAI
FALMSYTGYNMEDAVIMNKSSIERGMFRSTFFRLYSAEEIKYPGGQEDEILLPEPGVRGY
KGKDYYRLLESNGIVSPEVDVKGGDVLIGKVSPPRFLQEFKELSPDQAKRDTSIITRHGE
RGTVDLVLVTETSEGNKLVKVRVRDLRIPEIGDKFATRHGQKGVVGMIIPQVDMPYTTSG
LTPDIILNPHALPSRMTVGQIMEALSGKFVAATGESIDATPFYNIPIEEIQKKLLNSGYL
GDGSEVVYDGRTGEKLKGRILFGIVYYQKLHHMVADKMHGRGRGPVQILTRQPTEGRARE
GGLRFGEMERDCLIGYGAAMLIKDRLLDNSDKATVYVCEQCGYVGWYDRSKNKYICPIHG
DKSTLYPVAVSYAFKLLLQELMSMVIAPKLVLGERVSVGGNSNE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttaactattgatgacagatgggcaattgtagaggcatattttaaatctagaggccta
gttagacagcacttagactcttttaatgattttataaaaaataaactgcaagagattata
gatgagcaagccgaaattacgacggaaataccaggtcttaagatcagacttggaaaaata
agggtgggtaaacctagggtcagagaggcggataagggagataaggaaataacgcctatg
gaggctagacttagaaatctaacttacgctgcacctgtctatttagagatgactccaatt
gagaacaatattgagggagatcttactgaggtttacataggcgatatacccataatgtta
aaatctatagccgatcctacgtcagagttcaccagcgaaaagttagtggagattggtgag
gatccaaaggatccaggtggatactttattgtcaacggaagcgaaagagtaatcgtgacc
caagaggacctagctacgaacagagttcttacggatgtaggtaaaacaggatccaatatt
actcatacggctaagattatctcaagtacatcaggctatagagtacctataactatagag
aaattaaaagattctacaatacacgtatcgttcccagctgtaccggggaaaatacctttt
gcgatcttaatgagggctttgggaattgagaccgatgaggagataacgttagctgtttca
ttggatccagacatacaaaacgagcttcttccttcgatagagcaagccagttctataata
tccaaggatgatgctctagattttataggcaataggattgctataggccaaaaaagagag
atgaggattcaaaaggccgagcaggttctcgataaatatttcttaccccacataggtaca
aacgcatcggacagaactgcaaaggcatactatttagcttttgcagtatcaaagctgatt
gagttatatctaggaagaagagagccagacgataaagatcattacgcaaacaaaaggtta
aagctggcaggagatttgttcgctagcctctttagagtggcttttaaggcctttgtaaag
gatctagttttccagcttgaaaagtctaaggtgagaggaagaagattagccgttaacgct
ctagttaggcaagatataatttcggagaggataagacatgcattagctactggaaattgg
gtgggaggaagaacaggagtaagccagttactagatcgtactaactggttatcaatgtta
agtcatttgagaagagtggtttcttctttagccaggggtcagcctaactttgaggctaga
gatctccacggcactcaatgggggagaatgtgtccattcgaaactcctgaaggtccaaat
agcggtttagtcaaaaacttagccttgttagggcagatttcggttggagtaaatgagaaa
agtgtagaaaggctactttacaacctaggagttattcctatagaagaagtaatcaagaag
tacagatctcaagaggagaagagtgaagactatgaaaattggagtaaggtcatattaaac
ggaaggctgattggatattatcccaatggaagtgaactggctgagaaaattagggaaaag
aggagagagggagagctaagcgacgaagttaatgtgaattatacaaggacagaaacttac
aacgaggtttatataaactcggatagcggaagggtaagaagacctcttatagtagtaaga
catgggaagccactggtgacgaaagaggacatagagaacctaaagaaggggaagataact
ttcgatacattaattagagagggaaaaatagaatttttagatgctgaagaagaggaaaac
gcttatattgccttagagcctaaggacgtaacaaaagatcacacccatttggagatatgg
actcctgccatattgggaataacagcgtccattataccatatccagagcataatcagtct
ccgaggaacacgtatcagtccgcgatggccaaacaagctctaggattatatgcggctaat
taccagataagaacagacaccagggcacacttactccactatcctcaaaagccaatagtt
cagaccagggcattagaggccataggatacacagagaggcctgcaggcaataacgccata
tttgctcttatgtcctacacaggttataacatggaagatgctgtaatcatgaataaatcc
tccatagagagaggaatgtttagatctacattcttcaggttatattcagctgaagaaata
aagtatcctggtggtcaagaagacgagatacttttacctgaaccaggagttagaggttat
aaaggtaaagattactatagattactcgagtcaaatggaattgtatctcctgaggtggac
gtaaagggcggagatgtgttaatcggtaaagttagtccacctagattccttcaagagttt
aaggaattatctcctgatcaggcaaagagagacacatctatcataacgaggcatggagaa
cgagggaccgtagatcttgtcttagtcacagagacctcggaaggtaataaattggtcaag
gtgagagtcagagacctaaggataccagaaataggggataagtttgctactagacacggt
cagaaaggagtagttggaatgattattccccaagttgatatgccttatacaacttctggg
ctaacgcctgatataattctgaatccacatgcccttccttctaggatgacagttggacag
attatggaagcgctatcggggaaatttgtagccgctacaggtgaatcgattgatgcaacg
cctttctataacattcctatagaggagatacagaagaagttattgaactcaggctattta
ggggacggttctgaggtcgtttatgacggaaggacgggggagaagttaaagggtagaata
cttttcgggatagtatattatcagaaacttcatcatatggtagctgataaaatgcacgga
cgtggaagaggtccagttcagatccttacgaggcagcctactgaaggaagggcaagggaa
ggcggtcttaggttcggtgagatggaaagagactgtcttataggttacggagcggctatg
ctaatcaaggacagactattagataactcagataaggctaccgtttacgtgtgcgaacaa
tgtggttacgttggatggtacgataggtcaaagaacaagtacatatgcccaattcatgga
gacaagtctactctttatccagtagcagtctcttatgcctttaagttattacttcaagag
ctgatgagtatggttattgcacccaagctagttttgggagagagagtctctgtaggaggt
aattcaaatgagtga
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