KEGG   Metallosphaera cuprina: Mcup_0050
Entry
Mcup_0050         CDS       T01467                                 
Name
(GenBank) DNA polymerase sliding clamp subunit B
  KO
K04802  proliferating cell nuclear antigen
Organism
mcn  Metallosphaera cuprina
Pathway
mcn03030  DNA replication
mcn03410  Base excision repair
mcn03420  Nucleotide excision repair
mcn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mcup_0050
   03410 Base excision repair
    Mcup_0050
   03420 Nucleotide excision repair
    Mcup_0050
   03430 Mismatch repair
    Mcup_0050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcn03032]
    Mcup_0050
   03400 DNA repair and recombination proteins [BR:mcn03400]
    Mcup_0050
DNA replication proteins [BR:mcn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mcup_0050
DNA repair and recombination proteins [BR:mcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mcup_0050
   MMR (mismatch excision repair)
    Other MMR factors
     Mcup_0050
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Mcup_0050
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Hus1 OspE Ubiquitin_2 DUF6252
Other DBs
NCBI-ProteinID: AEB94161
UniProt: F4FXW3
LinkDB
Position
complement(45870..46616)
AA seq 248 aa
MMFRAIYASSKDFYYIISSMSKITDNLPINLTEEGISSKYLTEDKVMMGVVDISKDSLEE
YQIEKPMSIELNLNDLKKILSKMKGRSSIEIYEIEDGIRITVRDEKTGTRSNLSLKVEKK
EVQSLKEPSVNHSVTAKIDGEIFKAIISEASKIGDEIEIVAENDSIVLKVQETGKGYIAT
LREGKPLSELMIESLTNVRYGTPVLEKVVNALSFSSEIEFSLGSGVPMKIIAPLEKGASL
KFWVAPRL
NT seq 747 nt   +upstreamnt  +downstreamnt
atgatgtttagagcaatatacgctagttcgaaagatttttactatattatttcttctatg
tctaagataactgataacttacccatcaaccttacagaagaagggataagtagtaaatat
ctaacagaggataaagtaatgatgggagttgttgacataagcaaggattcactcgaagag
taccaaatagagaaacctatgtctatagaacttaatctaaatgatttgaaaaaaatatta
tcaaagatgaagggaagatctagtatagaaatatacgaaattgaggacggtataaggata
acagttagagacgagaagacgggaacgcgaagcaacttgagcctaaaggttgagaaaaaa
gaagttcaatcgttaaaggagccctccgttaaccatagtgttacagcaaaaattgacggt
gagattttcaaagctataattagtgaagcttctaaaataggggatgaaatcgagatagtt
gctgagaatgatagcatagtactaaaagtccaagagaccggcaaaggttacattgcgacg
cttagggaaggtaagcctttatctgagctgatgattgaaagcttaacaaacgttaggtac
ggcacccctgttctagaaaaggtagtcaatgctttatctttttcaagcgaaatagagttc
agtttaggtagtggagtacctatgaaaataatagctcctcttgagaaaggagctagctta
aagttctgggtggcgccaagactttag

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