KEGG   Metallosphaera cuprina: Mcup_0054
Entry
Mcup_0054         CDS       T01467                                 
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mcn  Metallosphaera cuprina
Brite
KEGG Orthology (KO) [BR:mcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcn03400]
    Mcup_0054
Enzymes [BR:mcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mcup_0054
    5.6.2.6  RNA 3'-5' helicase
     Mcup_0054
DNA repair and recombination proteins [BR:mcn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Mcup_0054
SSDB
Motif
Pfam: DEAD Helicase_C WH_Lhr DEAD_assoc ResIII AAA_19 Lin1244_N Cas3-like_C_2 DEXQc_Suv3 DUF6581 RUBY_RBDX DUF7130
Other DBs
NCBI-ProteinID: AEB94164
UniProt: F4FXW6
LinkDB
Position
48601..51318
AA seq 905 aa
MYSTAQEFILKLRSLGYTQLTPIQKMAIPSILKGKHTLIVAPTGHGKTEAAIIPVMYHLF
LNKYNKISALYISPLRALNRDLEARLKRIGQEFGVNVSTRHGDNSRKEKKDVVLNPPDLL
ITTPETLLYLITYNRMKNLLSNLRWIIIDELQEMLDEKRGYELSVVIQRIKRITKNPRII
GLSATISNIELAKAYLSLNEDVEVAKIDARKEMEVIVDIPQVSREIVDKSLRYGKDPVLF
SRLTRLVEIIEKSKPTLIFTNTRETAEFLAHELGQMFNIKIASHHGSLSREVRMDTENEF
KKGKLDAIVATSSLELGIDIGNISLVIQYMSPRQCVRLVQRVGRSGHSLKGVAKGIVIPG
SSIYDVLESKAITELSREYLEPMVPEENPLDVIAHQLAGMVIDEPVSLKDALEIFHGSPY
FKNLSLEELEEVIEQLQAEKVIKREGDKLKPSRRTWKYYYSINMIPDSNTSYTVIDTDSN
QKVGNLDFDFVSILSEDDVFILGGKLWRVISIDDGKVYVVSAELKKGDLPSWFGEAIPVE
KEISMKVYSYLEDILSGKITVEKEIREKLEDHLSRNYPIPRRDEILVELIGSDLIVIHSP
FGSKGNNTLGSLICAIFASKGYTVSYRNDPYHIVITSMSSFNLQLVNEVINKLSLIDLKY
ASSLLESEIIGSPQFKWILLIEAQRFGAIDKGVEAKLGQYVLKAYIDTIIGKEAIKEFLV
KFHDLDVIPLIRKVKWNVVEVPSPSPLAEDFLQRLLAFTPSNEKPLMIEVFKRRMMNKEL
LFICLMCGWNSTSKVSETPNKCPKCDSVFITSTFPDDKEAIDIIRKNIEGKRLNGKERKR
LSELKLISSLFTNYGRMTFLALAVRGIGPSNLANVLRYLSQGEDKFYEKLMEEERKFIRY
RKYWQ
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgtattcgaccgctcaggaatttatcttaaaacttagatctcttggatatactcagctt
actcctattcaaaaaatggcaataccaagtatactaaaaggaaagcacactttaatcgtt
gctccaactggtcacggaaaaacggaagccgcaataatccctgtcatgtatcatctattt
ttaaacaaatataataaaatatctgctttgtatatttcgccattaagagcattaaataga
gatttagaggcaaggctaaaaagaattgggcaggagtttggggtaaacgtaagcactaga
catggagataactccaggaaggagaaaaaagacgtggtactaaatcctcctgatctcctt
ataactactcctgagacgcttctctacctgatcacttacaatagaatgaaaaatttactt
agcaacttaagatggattataatagacgagcttcaggagatgctggatgagaaaagaggc
tacgaattgtcggttgttattcaaaggatcaagagaattacgaaaaatccaagaattata
ggtttgtctgcaacaataagtaacattgagttagctaaggcatatctaagcttaaacgaa
gatgtagaagtcgctaaaatagatgcaagaaaagagatggaggtaatagttgatatacct
caagtctcaagagaaatagtagacaaatctttaagatatggcaaggacccagttttattt
tccagattgacaaggctagttgagataatagagaaaagcaagcctactttaatttttaca
aatacaagagagacggcagagtttcttgctcatgaacttggccaaatgtttaacattaag
atagcctctcatcacggttcgctttctagagaggtgagaatggacacagaaaatgagttt
aagaagggaaaactggatgccattgtggccacctctagcctagagctaggaatagatatt
ggtaatatctctctagtaattcagtatatgtccccaaggcagtgcgtaagactagttcaa
agagtcggacgaagtggacattcactaaaaggcgtagctaaaggcatagtaataccaggg
agttctatatacgacgttttagagtcaaaagcaattacagagctttccagagagtatctt
gagcccatggtgcccgaggaaaatcctctagatgtaatagctcatcagctagccgggatg
gtaatcgatgaaccggtgtccctaaaggatgcccttgaaatctttcacggttctccatat
tttaagaacctatcactcgaggaattagaagaagtaatagagcagttacaagcagagaaa
gttataaagagggaaggagacaaattgaaaccgtcaaggaggacatggaagtactactat
agtattaacatgatacctgactccaacacatcttacactgttatagataccgattctaat
cagaaagtaggaaatctagattttgatttcgtctctatacttagtgaggatgacgttttc
attttaggcggtaagctttggcgtgttatctcaatcgatgatgggaaagtctatgtcgtt
tcggcagaactaaagaaaggtgacttacctagttggttcggcgaagctattcctgtggag
aaggagatatcaatgaaagtatatagttaccttgaggatatcctatctggaaaaattacg
gtagaaaaagagattagagagaagttagaagatcatttatctaggaactatccgattcca
aggagagatgagatccttgtggagctaattggatcagacttgatagtcattcattctcct
ttcggatctaagggtaacaatactttaggttcactcatttgtgccatttttgcctcaaaa
gggtatacagtctcctacagaaacgatccttatcacatagtgataacctcaatgtcttct
tttaatcttcaattagtaaatgaagtaattaataaactcagcctgatagatttaaaatat
gcatccagtctgttggaaagcgagataataggttctccccaattcaaatggatcttactt
attgaggctcaaagatttggggctatagataaaggagttgaggctaaattgggccaatat
gttctaaaggcatatatagataccataataggtaaggaggctataaaagaattcttggta
aagtttcatgacttagacgtaataccactgattaggaaagttaaatggaacgttgtagag
gtaccttcaccctcacctctggctgaggacttcttgcagcggctccttgcgttcactcct
tctaatgaaaagcctctcatgatagaagtatttaagaggagaatgatgaataaagaactt
ctcttcatatgtcttatgtgtggatggaattctacatccaaagtatccgagacacctaac
aagtgtccaaaatgcgattctgtctttataacctcgacttttcctgatgacaaagaggct
atagacataataaggaagaatatagaagggaaaagacttaacggtaaagagaggaagaga
ttatctgagctgaagctcatctcttcactctttactaattacggaagaatgactttcttg
gccctagcggtaagaggaataggtccttcgaatctagctaacgtattaaggtatctctca
caaggagaggataagttctatgaaaaattaatggaggaagagaggaagtttattcgttat
agaaagtactggcagtaa

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