Metallosphaera cuprina: Mcup_0495
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Entry
Mcup_0495 CDS
T01467
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mcn
Metallosphaera cuprina
Pathway
mcn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mcup_0495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcn03021
]
Mcup_0495
Transcription machinery [BR:
mcn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Mcup_0495
Prokaryotic type
Archaeal type
TFB
Mcup_0495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_11
Sigma70_r4
DUF6398
HTH_30
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AEB94602
UniProt:
F4G0I3
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All DBs
Position
complement(449818..450732)
Genome browser
AA seq
304 aa
AA seq
DB search
MKCQVCGGEEIIFDPSRGIYVCKNDGVVVEDHIIDQGPEWREFDSADRNKKRRVGSGVTE
RVHDKGFTTVIGGGKVKDRLKVIRLQRLQNKSRVTSKDKKLVTFLSILNGEAARMGLPNY
VKEEAAFVIRRLVEMGLARRIDMYVLVGITLFYVARMNRIPVQLNEIKEMYNASSKTIWD
CLERVQLVLKSDIGLTRPEKQIINSYPNRAPTPLEYIPKIVGKTNLPQPVETKAAEIAEL
LYRSGLTSGKGYLPTAAAIVYLVSALLDTKKTQKEMAESLKVTEVTIRNRYKEIIDSLDI
DVLL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccaggtatgtggtggagaggaaataatatttgacccaagcagaggtatatac
gtatgtaaaaatgacggagttgtagtcgaggatcacataattgatcaaggtcccgagtgg
agagaattcgattccgctgacagaaacaagaagaggagagtcgggtctggggtgactgag
agagttcatgataaaggattcactacggtgataggaggtgggaaggttaaggacaggctt
aaggttatcagacttcaaaggctacaaaacaaatcaagagtaacatcaaaagacaagaag
cttgtgacgttcctctctatacttaatggcgaagcggctaggatgggattacctaactat
gtcaaagaagaggcagcatttgtaattagaagactagttgagatggggttagctagaagg
atagacatgtacgtgcttgtaggtataacgttgttttatgtggctaggatgaacagaata
cctgtacaacttaacgagataaaggagatgtataacgctagctctaaaacgatttgggat
tgcttagagagagtgcagctcgtgttaaagagtgatattggtctgacgcgcccagagaag
cagataattaacagttatcctaacagggctcccacacctctagaatatattccaaagatt
gtaggcaagactaacctacctcaacctgtggagactaaagctgctgagatagctgagctc
ctctatagatctggtttgacaagcggaaagggttatttacctaccgccgctgcaatagtc
tacctagtcagcgcgctgcttgatacaaagaaaacgcagaaagagatggcagaatcctta
aaagtaactgaggttacaataaggaacagatataaggaaattatagactcacttgatata
gatgtactcctatga
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