Metallosphaera cuprina: Mcup_1240
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Entry
Mcup_1240 CDS
T01467
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mcn
Metallosphaera cuprina
Brite
KEGG Orthology (KO) [BR:
mcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcn03400
]
Mcup_1240
DNA repair and recombination proteins [BR:
mcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mcup_1240
Archaeal homologous recombinant proteins
Mcup_1240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_13
AAA_23
Rad50_zn_hook
AAA_29
SbcC_Walker_B
AAA_27
RsgA_GTPase
ABC_tran
T3SS_basalb_I
Fez1
Motif
Other DBs
NCBI-ProteinID:
AEB95345
UniProt:
F4G3H5
LinkDB
All DBs
Position
complement(1119352..1121931)
Genome browser
AA seq
859 aa
AA seq
DB search
MRIESVSLKDFLSHDRTQVNFKGEINVIIGQNGAGKSSIIDAITFALFKEARENVSELIR
KGSKSAEVELILKEGSNSFKVVRSIPASDYFYENDKLSARQSREVDKKVESIGLNKKVML
STTFVKQGEIESVFEDLTGVLKKVMMIDSLEKLTSSDGKIKRLIDAYEVEMKSYQRYEDE
LKRVSSDILSTSSDIATLEASVSSLQDELHRLHELEDIKSKEVATLEEKFKVYTEVRTQL
ETNRRERTQILNELDSYKDLDSQLAESQTRLKELQELTKKKDLISKLESETKRYQELNIV
LRDEMKRRDSIKANLDLKEKLEPYHKEYQELYQKQRDLREAYEKFRELRAALCERRRQRD
LNSKKLAAVKLVRKAEDLERELSLMSAERDEAHNEISRLELELVQIRKGREALISANEGK
CPVCGGPLDEAHRKELIDKYDRREREIVGEMESLQRKYESLKREVEILNKQLSEARSNES
LIKTIQENLEGLNQEIAQLEASLSELTEKANQYELINERLEHLKEYEDEYNSVRSYKEED
LYELEEMLATHEHTLHDVKEEINNLKREVGNLTRDQIERAELELQEVTNRLNELNKKRGK
REELVKRRYVLEESIERLKQKLDALNFEEEELRKAKVELDSIRRQVQTVERDLGEKRGKL
EQMRISLSNLERTKRDLETKLSEANKLRNEKERLEKLRQVLSESRLQSFLISTLISRIEN
NLNDIMSMFNMSFSRVTIRMGSTKGLKGKVEIKVYTQSGQELQIGLLSGGERIALALALR
IAIARSLMGELGFMILDEPTTHLDSERRTELLSIIRDSMNVVPQIIVVTHDEEVLQIADY
VLRVEKLGDVSRVKEEVIQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagagagtgtaagtttaaaggacttccttagccacgataggactcaagtcaac
tttaagggagagatcaacgtcattataggacagaacggtgcaggtaagagctcaataatt
gacgcgataactttcgcccttttcaaggaagctagggagaacgtgtcggagttgattagg
aaaggtagtaagtcggccgaagtcgagttaattttgaaagaggggtcgaactcctttaag
gtagtcaggtccatcccagcctctgattacttttatgagaacgataagctttccgcgaga
cagagtagggaagtcgacaagaaggttgagagtatagggttaaacaagaaggtcatgttg
tcaacgactttcgtcaaacaaggggaaatcgagagcgtctttgaggaccttacaggcgtc
cttaagaaggttatgatgatagatagcttggagaagctcacctcatctgacggtaagatc
aagaggttaatagacgcctacgaggtagagatgaaatcttatcagagatatgaagacgag
ttgaagagggtaagcagtgacattctgagtacatcctcggatatagccactctcgaagcg
tctgttagtagccttcaggacgaacttcatagactgcacgagctagaagacattaaaagt
aaagaggttgcgactcttgaggagaagttcaaagtttacacagaggtgaggactcagctg
gagactaacaggagggaacggactcaaatcctaaacgagctcgactcatacaaggaccta
gattctcagttagctgagagtcaaactaggctcaaagagcttcaggagttaactaagaag
aaggaccttatatcaaagctagagagcgaaaccaaaaggtatcaggagttaaacatcgtg
ttgagggacgagatgaaaaggagagactcaataaaggctaacttagaccttaaggagaaa
ttggaaccttaccataaggagtaccaagagctctatcagaaacagagggacttaagagaa
gcgtatgagaagttcagggaattaagggccgcactttgtgagagaaggcgacagagggat
ttaaactcgaagaagttagctgcagtcaagctagtcaggaaggctgaggacttggagaga
gagctcagcttaatgtccgcggaaagagacgaagcgcacaacgaaatcagtcgacttgaa
ctcgaactagtccagataaggaagggcagagaagctttgatctcagctaatgaagggaag
tgtcctgtttgtggaggaccgctggacgaggctcataggaaggagcttattgacaagtac
gataggagagagagggaaatcgtgggcgagatggagagcttacagagaaagtatgagtcg
ctaaagagggaggttgagatattgaataaacaactcagtgaggctagatcgaatgagagc
ttaattaagacgatccaagagaacttagagggtttgaaccaggagatagctcaacttgag
gcaagcctgagcgagcttacagaaaaggctaatcaatacgaactaataaatgagagattg
gaacacctcaaggagtacgaagacgagtacaactcagttagaagttacaaggaagaggac
ttgtatgagttggaagagatgttagctactcacgaacatacgttacacgacgtcaaagag
gagatcaacaatcttaaacgagaggtaggtaacttaaccagagatcagatagagagggct
gagctcgagttacaagaggtcactaataggttaaacgagttaaataaaaagagaggaaaa
cgtgaggagttagttaaaagaaggtacgtcctagaagaaagtatagagaggttgaaacaa
aaacttgacgcgttaaattttgaggaggaggagttgagaaaagctaaggtggagttggac
tcaataaggaggcaagttcaaacagtcgagagggacttaggcgaaaagagggggaagctg
gaacaaatgaggataagtttgagtaatctagagagaacaaagagggacttggagactaag
ctttcagaggcgaacaaattgagaaacgaaaaggaaaggctagaaaagttgcgacaagtt
ctatccgagagcaggcttcagtcctttctcatatctacattgatcagtaggatagaaaac
aacctaaatgacataatgtcgatgtttaacatgtcattttcaagggttacaatacgcatg
ggttccacgaaaggtttgaaaggtaaggtcgagatcaaggtttacactcaatcaggacag
gaactacagatagggttgcttagtgggggcgaaaggatagctcttgccttagccttaagg
atagccatcgctagatcattgatgggagagctaggcttcatgatattggacgaacctacc
acccacttagactccgagaggaggaccgagttgctttccataataagggactccatgaac
gtggttcctcaaataatcgtggtaactcacgacgaggaggtgttgcagatcgctgattac
gtcttgagggttgagaaactaggtgacgtaagtagggtcaaggaggaggtgatccaatga
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