Metallosphaera cuprina: Mcup_1242
Help
Entry
Mcup_1242 CDS
T01467
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mcn
Metallosphaera cuprina
Brite
KEGG Orthology (KO) [BR:
mcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcn03400
]
Mcup_1242
DNA repair and recombination proteins [BR:
mcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Mcup_1242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HerA_C
HAS-barrel
TrwB_AAD_bind
AAA_10
FtsK_SpoIIIE
TACC_C
GldM_1st
COG7
CbiA
PhageMetallopep
TMP_3
Motif
Other DBs
NCBI-ProteinID:
AEB95347
UniProt:
F4G3H7
LinkDB
All DBs
Position
complement(1123081..1124559)
Genome browser
AA seq
492 aa
AA seq
DB search
MIIGYVIGEASPQEALMLAEKPVRVGRYVVLEYDGIKVLGLITYVSRGSPLLDITLNDIK
IVQKMKDLDTSIPQFVKAVIKLLYDMRSKSIPDLPPGPGTPVRLAEEEELLEIFSEGDIV
IGSLIGVNIPVKIKVNSLSRHLAILAATGSGKSNTVAVLSQAIASIGGSVVVFDYHGEYY
GSDIKPLNNIDPKLNPLYLTPKEFATLLDIRSNAHIQYRFLRQAFTTYVNEIRERMKDGN
VNYAELNNSFVSDIEKKVDEIAADEKQRSQKDAADEVKNKIEEFADKYGDIVDLTVSDIV
SRLRPSSVNVVDISRMDEESMDAVVSHYLRRILDSRKEYKHRKTGLGFPVVTVIEEAHVF
ISKNDDTLTKYYVSKISREGRKFGVSMVIVSQRPKGLDDTILSQMTNKIILRMVEPTDKK
YVLEASDNLTEDLVEQLSSLGVGEAIVIGNLVKLPAFIKISKFAGNLGGSDPDILGEWNK
FMKSINVDSEFG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgattatcggttacgtaataggagaggcatcacctcaggaagctttgatgctcgccgag
aagcctgtgagagttgggcgttacgtagtgctagagtacgatgggattaaggttctgggt
ttaatcacgtacgtgagtcgaggtagtcctctccttgacattactttgaacgacattaag
atagttcagaaaatgaaggacctggacacctcaatacctcaattcgttaaggccgtcatc
aaactactttacgacatgagatcaaagtcaattccagacctacctcctggtcctggaacg
cccgtgaggctagctgaggaggaggagctcttagaaattttctcggagggcgatattgta
ataggatctttaattggggtcaacatacctgttaaaattaaggtcaactcgttatctcgt
catctcgccattttagctgcaacgggtagcggaaaatctaataccgtggctgtcctctct
caggcgatcgcgtcaataggtggttccgtagtagtgttcgactatcacggtgagtattac
gggtccgatataaaaccattaaataatatagatccaaaattgaatccattatatctcact
cctaaagagtttgctacacttttagatatcagatctaatgctcatatacaatatagattt
ttaaggcaagctttcacaacgtacgttaacgagataagggagaggatgaaggacggtaac
gtaaattacgcggagctaaacaactcattcgtttcagatatagagaagaaggttgatgag
atcgcggcagacgagaagcagagatcacaaaaagacgcagctgatgaggttaagaacaag
atagaggagtttgctgataagtatggggacatagttgatttgacggtgtcagacatagtg
tccagattaaggccttcatcggtcaacgttgtggacataagtaggatggatgaggagtca
atggacgcggtagtctctcactacttaaggaggatcctcgatagcagaaaagagtataaa
catagaaaaacgggcttaggttttccagttgttacggttattgaggaggcgcatgtattt
atttcgaaaaacgatgacacacttaccaaatattacgtttctaagatatcaagggaaggg
aggaagttcggggtgagcatggtcatagttagtcagagacccaaaggcttagatgacact
atattgagccagatgacgaacaagatcatcttaagaatggtggaaccaacggacaagaaa
tacgtgctggaggctagcgataacttgacggaggatctggttgaacagctgtcctcttta
ggagttggagaagctatagtgataggtaacctagtgaagttgccagctttcataaagatc
tctaagttcgctggcaacttgggaggatcagatccagacatattgggagagtggaacaag
ttcatgaagtctataaacgtagactccgagttcggatga
DBGET
integrated database retrieval system
