Metallosphaera cuprina: Mcup_1863
Help
Entry
Mcup_1863 CDS
T01467
Name
(GenBank) AAA family ATPase, CDC48 subfamily protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mcn
Metallosphaera cuprina
Brite
KEGG Orthology (KO) [BR:
mcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcn03019
]
Mcup_1863
03009 Ribosome biogenesis [BR:
mcn03009
]
Mcup_1863
04131 Membrane trafficking [BR:
mcn04131
]
Mcup_1863
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcn04147
]
Mcup_1863
Messenger RNA biogenesis [BR:
mcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mcup_1863
Ribosome biogenesis [BR:
mcn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mcup_1863
Membrane trafficking [BR:
mcn04131
]
SNARE
SNARE associated proteins
Others
Mcup_1863
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mcup_1863
Exosome [BR:
mcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mcup_1863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_22
AAA_5
TIP49
AAA_14
AAA_33
AAA_18
IstB_IS21
AAA_28
RNA_helicase
nSTAND3
Mg_chelatase
ATPase_2
AAA_24
Vps4_C
AAA_17
AAA_3
DUF815
UFD1
AAA_25
ATP-synt_ab
Parvo_NS1
AAA_7
NB-ARC
Zeta_toxin
TsaE
ABC_tran
NACHT
Bac_DnaA
NTPase_1
PhoH
DUF4131
SPT16
Motif
Other DBs
NCBI-ProteinID:
AEB95965
UniProt:
F4G178
LinkDB
All DBs
Position
complement(1696064..1698370)
Genome browser
AA seq
768 aa
AA seq
DB search
MSAGSSPEQKPSRRELALRVFEARQKDVGRGKVRIDVELLAQIDVSPGDVVEIEGTRKTA
AIAWPLSPDDATSERDIIRMDGITRKNAGVSIGDKVIVRKASVKQAASIKLAPSNFSITV
DPGFVAYVKKKLKEFPLVEGDTVLIPVLGQAIPFTVIQVRPASIVMVVDETSISIADKPI
EQTRYPRVTYEDIGGMKNVIQKIRELVELPLRHPELFKRLGIEPPKGIMLYGPPGVGKTL
LAKAVANETESYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEVDAIAPKR
DEAIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPD
KQGRLEILQIHTRNMPLSKDVELEKLADISHGYTGADLSALVREAAMNALRRYLPMIDIS
QDKIPPEILEKMEVKMEDFMNAFKEIVPSGMREIYIEVPEVKWDDIGGLGDIKEELREVA
EYPLKFPDYYETAGVEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVG
ESERAIREIFRKARMYAPSVIFFDEIDAVAPMRGISSDSGVTERLVNQLLAEMDGIENLD
NVVIVAATNRPDILDPALLRPGRFEKLVYVPPPDKNARYDILRVHTKKVALSDEVNLEEL
AERTEGYTGADLAALVREAAMRAIREGMRECVNKVSTQCAQNDRDCRDAKMRDCMKGATI
KVENRHFDEALKKVKPSLTQEMIQFYQSWIDKARQQLPRQTVKPSTFT
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgctggttctagcccagagcaaaaaccatcaagacgtgagctcgctctaagggta
tttgaagcaagacaaaaggacgtaggtagagggaaagtaaggatagacgttgagttgctt
gctcaaattgacgtgagcccgggagacgttgtcgagatagaaggaactagaaagacagct
gcaatagcatggcctttatcaccagatgacgcaacgtctgaaagggacataatacgaatg
gacggtataacaagaaagaacgcaggggtgtctataggagacaaagtaatagttcgtaag
gcttcagttaaacaggccgcctctattaagctagctccatctaatttctcaattactgta
gatccaggtttcgtggcttacgttaagaagaaactaaaggagttcccacttgttgaaggt
gacactgtactcatacctgttctaggacaagcaataccatttacggtgattcaagtgaga
ccagcgtctatagtaatggtagtagacgaaactagtatatctatcgctgacaaacctatc
gagcaaactaggtatcctagagtaacttatgaggatataggtggtatgaagaacgtaata
cagaagataagagaacttgtagaactaccactaagacatcctgagctgttcaagaggcta
gggatagagcctccaaagggaatcatgctttacggtcctcctggtgtaggaaagacgttg
ttagctaaggcggttgccaacgaaacagagtcttatttcacttcgataaacggaccggaa
ataatgagtaagttctatggtgaaagcgagcagaggcttagggaaatattcgaggacgct
aagaaacacgctccggctatcattttcatagatgaggttgatgctatagctcccaaaagg
gatgaagcgataggggaagtagaaaggagagttgtggcacagttacttactttaatggat
ggccttgagaacagaggtaacgtcatagttatagccgcaactaatagaccgaacgcggtt
gatcctgctctaagaagacctggaaggttcgatagggagatagagatacctctcccagat
aaacaagggcggcttgagatacttcagatccacaccaggaacatgcctctttcgaaggat
gtggaactagaaaaactagctgatataagtcacggatacacaggagctgacctatctgcg
ctagttagagaggccgcaatgaacgcgttaaggagatatcttccgatgattgatataagc
caggacaagatacctcctgagattctagagaagatggaggtaaagatggaagacttcatg
aacgcattcaaggaaatagtacctagcggaatgagggagatatatattgaggtaccggaa
gttaagtgggacgatattggaggactaggtgacataaaggaggagttaagagaggtagct
gagtatcccttgaagttccccgactattacgaaacggctggtgtagagccaccaaagggc
atacttcttttcggtccaccaggtaccggaaagaccatgttagctaaggctgttgctaca
gagagcggggcgaacttcattgcagtcagaggacctgaagttctctccaagtgggtaggt
gagagcgaacgcgcaattagagaaatattcaggaaagcgaggatgtacgccccgtctgtg
atattctttgatgagatcgatgccgttgccccaatgagaggaatttcctccgattccggt
gttactgagaggctagtaaatcaattgctggccgaaatggacggtattgagaacctagac
aacgtggttatagttgcagctaccaatagacctgatatcctagatccggctctactgagg
cccgggagatttgagaagttagtttacgtaccacctcctgataagaacgccagatatgat
atcctaagggtacacacgaagaaggtagccttgtctgatgaggttaaccttgaagagtta
gccgagagaacagagggttacactggtgctgacctcgcagcgttagtgagagaggcagct
atgcgggcaataagagaaggtatgagagagtgcgtgaataaggtgagtacacaatgcgct
caaaacgacagagattgtagagacgctaagatgagggattgcatgaagggagcaacaata
aaggttgagaacagacattttgatgaagcgcttaagaaggttaagccatctctcacgcag
gagatgattcagttctatcaatcgtggatagataaggctagacaacagcttcctagacag
actgtgaaacctagcacatttacgtga
DBGET
integrated database retrieval system
