Metallosphaera cuprina: Mcup_1863
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Entry
Mcup_1863 CDS
T01467
Name
(GenBank) AAA family ATPase, CDC48 subfamily protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mcn
Metallosphaera cuprina
Pathway
mcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mcup_1863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcn03019
]
Mcup_1863
03009 Ribosome biogenesis [BR:
mcn03009
]
Mcup_1863
04131 Membrane trafficking [BR:
mcn04131
]
Mcup_1863
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcn04147
]
Mcup_1863
Messenger RNA biogenesis [BR:
mcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mcup_1863
Ribosome biogenesis [BR:
mcn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mcup_1863
Membrane trafficking [BR:
mcn04131
]
SNARE
SNARE associated proteins
Others
Mcup_1863
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mcup_1863
Exosome [BR:
mcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mcup_1863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_22
AAA_5
TIP49
AAA_14
AAA_33
IstB_IS21
AAA_28
RNA_helicase
nSTAND3
Mg_chelatase
ATPase_2
AAA_18
AAA_lid_PRS2_C
AAA_24
NPHP3_N
Vps4_C
ABC_tran
DUF815
AAA_3
AAA_17
AAA_7
Parvo_NS1
TsaE
ATP-synt_ab
NB-ARC
Zeta_toxin
AAA_25
NTPase_1
PhoH
Bac_DnaA
UFD1_N2
DUF4131
SPT16
Motif
Other DBs
NCBI-ProteinID:
AEB95965
UniProt:
F4G178
LinkDB
All DBs
Position
complement(1696064..1698370)
Genome browser
AA seq
768 aa
AA seq
DB search
MSAGSSPEQKPSRRELALRVFEARQKDVGRGKVRIDVELLAQIDVSPGDVVEIEGTRKTA
AIAWPLSPDDATSERDIIRMDGITRKNAGVSIGDKVIVRKASVKQAASIKLAPSNFSITV
DPGFVAYVKKKLKEFPLVEGDTVLIPVLGQAIPFTVIQVRPASIVMVVDETSISIADKPI
EQTRYPRVTYEDIGGMKNVIQKIRELVELPLRHPELFKRLGIEPPKGIMLYGPPGVGKTL
LAKAVANETESYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEVDAIAPKR
DEAIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPD
KQGRLEILQIHTRNMPLSKDVELEKLADISHGYTGADLSALVREAAMNALRRYLPMIDIS
QDKIPPEILEKMEVKMEDFMNAFKEIVPSGMREIYIEVPEVKWDDIGGLGDIKEELREVA
EYPLKFPDYYETAGVEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVG
ESERAIREIFRKARMYAPSVIFFDEIDAVAPMRGISSDSGVTERLVNQLLAEMDGIENLD
NVVIVAATNRPDILDPALLRPGRFEKLVYVPPPDKNARYDILRVHTKKVALSDEVNLEEL
AERTEGYTGADLAALVREAAMRAIREGMRECVNKVSTQCAQNDRDCRDAKMRDCMKGATI
KVENRHFDEALKKVKPSLTQEMIQFYQSWIDKARQQLPRQTVKPSTFT
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgctggttctagcccagagcaaaaaccatcaagacgtgagctcgctctaagggta
tttgaagcaagacaaaaggacgtaggtagagggaaagtaaggatagacgttgagttgctt
gctcaaattgacgtgagcccgggagacgttgtcgagatagaaggaactagaaagacagct
gcaatagcatggcctttatcaccagatgacgcaacgtctgaaagggacataatacgaatg
gacggtataacaagaaagaacgcaggggtgtctataggagacaaagtaatagttcgtaag
gcttcagttaaacaggccgcctctattaagctagctccatctaatttctcaattactgta
gatccaggtttcgtggcttacgttaagaagaaactaaaggagttcccacttgttgaaggt
gacactgtactcatacctgttctaggacaagcaataccatttacggtgattcaagtgaga
ccagcgtctatagtaatggtagtagacgaaactagtatatctatcgctgacaaacctatc
gagcaaactaggtatcctagagtaacttatgaggatataggtggtatgaagaacgtaata
cagaagataagagaacttgtagaactaccactaagacatcctgagctgttcaagaggcta
gggatagagcctccaaagggaatcatgctttacggtcctcctggtgtaggaaagacgttg
ttagctaaggcggttgccaacgaaacagagtcttatttcacttcgataaacggaccggaa
ataatgagtaagttctatggtgaaagcgagcagaggcttagggaaatattcgaggacgct
aagaaacacgctccggctatcattttcatagatgaggttgatgctatagctcccaaaagg
gatgaagcgataggggaagtagaaaggagagttgtggcacagttacttactttaatggat
ggccttgagaacagaggtaacgtcatagttatagccgcaactaatagaccgaacgcggtt
gatcctgctctaagaagacctggaaggttcgatagggagatagagatacctctcccagat
aaacaagggcggcttgagatacttcagatccacaccaggaacatgcctctttcgaaggat
gtggaactagaaaaactagctgatataagtcacggatacacaggagctgacctatctgcg
ctagttagagaggccgcaatgaacgcgttaaggagatatcttccgatgattgatataagc
caggacaagatacctcctgagattctagagaagatggaggtaaagatggaagacttcatg
aacgcattcaaggaaatagtacctagcggaatgagggagatatatattgaggtaccggaa
gttaagtgggacgatattggaggactaggtgacataaaggaggagttaagagaggtagct
gagtatcccttgaagttccccgactattacgaaacggctggtgtagagccaccaaagggc
atacttcttttcggtccaccaggtaccggaaagaccatgttagctaaggctgttgctaca
gagagcggggcgaacttcattgcagtcagaggacctgaagttctctccaagtgggtaggt
gagagcgaacgcgcaattagagaaatattcaggaaagcgaggatgtacgccccgtctgtg
atattctttgatgagatcgatgccgttgccccaatgagaggaatttcctccgattccggt
gttactgagaggctagtaaatcaattgctggccgaaatggacggtattgagaacctagac
aacgtggttatagttgcagctaccaatagacctgatatcctagatccggctctactgagg
cccgggagatttgagaagttagtttacgtaccacctcctgataagaacgccagatatgat
atcctaagggtacacacgaagaaggtagccttgtctgatgaggttaaccttgaagagtta
gccgagagaacagagggttacactggtgctgacctcgcagcgttagtgagagaggcagct
atgcgggcaataagagaaggtatgagagagtgcgtgaataaggtgagtacacaatgcgct
caaaacgacagagattgtagagacgctaagatgagggattgcatgaagggagcaacaata
aaggttgagaacagacattttgatgaagcgcttaagaaggttaagccatctctcacgcag
gagatgattcagttctatcaatcgtggatagataaggctagacaacagcttcctagacag
actgtgaaacctagcacatttacgtga
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