Microbulbifer sp. CNSA002: ACG1BZ_06315
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Entry
ACG1BZ_06315 CDS
T11270
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcns Microbulbifer sp. CNSA002
Pathway
mcns03030
DNA replication
mcns03430
Mismatch repair
mcns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACG1BZ_06315 (dnaE)
03430 Mismatch repair
ACG1BZ_06315 (dnaE)
03440 Homologous recombination
ACG1BZ_06315 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcns03032
]
ACG1BZ_06315 (dnaE)
03400 DNA repair and recombination proteins [BR:
mcns03400
]
ACG1BZ_06315 (dnaE)
Enzymes [BR:
mcns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACG1BZ_06315 (dnaE)
DNA replication proteins [BR:
mcns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACG1BZ_06315 (dnaE)
DNA repair and recombination proteins [BR:
mcns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACG1BZ_06315 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
XNW48869
LinkDB
All DBs
Position
1419996..1423514
Genome browser
AA seq
1172 aa
AA seq
DB search
MTQPFVHLRIHSEFSLIDGLVRIKPAIARAQELEMPALAITDQCNLYGQIKFYRACLGSG
IKPITAADFWLSEGGEGKPTLITLYAMNADGYRNITELISRAWMEGQYHGNAYIKREWVK
EYSEGVLMLSGAKYGDVGRALVAGRRAQAEELAREWAELFPGRYYLELQRTGRAGDEDYL
HSAVKLAQNLNLPVVATNDVRFMDESEFEAHEVRVCIHEGRALDDPRRERRYSAQQYFRT
PEEMWELFSDIPEALENTVEIAKRCSAPIQLGKYFLPEYPIPEGMTEDQFFEKVSYEGME
RRLATILDKSAANYAERRQIYEDRLRFELDIIIQMGFPGYFLIVMDFIQWAKDHDIPVGP
GRGSGAGSLVAYSLDITDLDPLQYDLLFERFLNPERVSMPDFDIDFCMEKRDRVIGYVAD
NYGRQAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPPDVGMTLQKAFDQEEI
LREFLDHDDEGQEIWEMALQLEGVSRNVGKHAGGVVIAPTKLTDFAPLYCDETGAGLVTQ
FDKNDVEDAGLVKFDFLGLRTLTIIDWAKRMVDETRAREGEEPLDIAALPLDDEETFKML
KRAETTAVFQLESRGMKDLIKRLQPDNLEDMIALVALFRPGPLQSGMVDDFINRKHGRAQ
VAYPDAKYQHEKLQPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEM
AKQRATFENGAKEQGIDPELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPA
QFMAATMSSDMDKTDKVVTFIEECRAMELVLVPPDVNLGSFQFSVDIDNRIIYGLGAIKG
LGEGPIENIIAAREEGGPFTDLFDFCSRVDPRKVNKRALEALVRSGALDSIGPDTNGADG
LDYSRAVLFNALDEAVKAAEQQKANANAGMMDLFGEVVPQASEGDVYEDFRRTRCWSIRE
RLEGEKNTLGLYLTGHPIDEYAGELQHLVKARIADLKPGRESQKVAGLVVAMRVMKTKRG
DSMAIVTLDDRSGRIEAAMFSEAFGEHRDKLAKDALLVLDGPVATDDYSGGLKMTVNSVS
TLDELRQSRVTGVRLRVDSGSVAPGLAKRLAACLQPYTGGQCGVSLEVSRHDARGLYRLP
PQWNVEPNDQMVQSLRELLGREQVALQYAQRR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaccctttgtccacctaagaattcactcagaattttccctgatcgatggcctg
gtaagaatcaagccggccatcgcccgcgcccaggagctggaaatgccggccctggcgatt
accgaccagtgcaacctctacgggcagatcaaattctaccgggcctgtttgggttccggt
atcaagccgattaccgctgcggatttttggctcagcgaaggcggcgaaggcaagcctacg
ctgatcacgctctatgcgatgaacgccgacggctaccgcaatattaccgagctgatttcc
cgcgcctggatggaggggcagtaccacggtaatgcctatatcaagcgcgaatgggttaag
gagtacagcgaaggggtgctgatgctgtccggtgccaagtacggcgatgtgggccgtgca
ttggtagcggggcgccgcgcccaggcggaggagctggcccgggagtgggcggagttattc
cccggtcgctactacctggaattacagcgcaccggtcgcgccggcgatgaggactacctg
cactcggcggtgaagttggcccagaacctgaacttgccagtggtagccactaatgacgtg
cgctttatggacgagagcgagttcgaggcccacgaggtgcgcgtttgtatccacgaaggc
cgcgccctcgatgaccctcgccgcgaacgccgctattccgcgcagcagtatttccgcaca
ccggaagagatgtgggagctgtttagcgatatccccgaagccctggaaaacactgtggag
atcgccaagcgctgctctgcaccgatccagttgggtaaatacttcctgccggaatatccg
attcccgagggcatgaccgaagaccagttcttcgaaaaggtctcctatgaaggtatggag
cggcgcctcgccaccatcctcgacaaatccgctgcgaactatgccgagcgccgccagatc
tacgaagaccgcctgcgctttgagctggatatcattatccagatgggatttcccggttac
ttcctgatcgtaatggactttatccagtgggccaaagaccatgatatcccggtgggcccg
gggcggggttccggtgccggctccctggtggcctactcgctggatattaccgatctggac
ccgctgcaatacgatctgctgttcgaacgattcctgaacccggagcgggtgtcgatgccc
gacttcgatatcgacttctgtatggagaagcgcgaccgggtaattggctacgttgcggat
aactatggccgtcaggcggtgagccagattattaccttcggaaccatggccgcgaaggcg
gtggtacgggacgtggcgcgggtacagggcaagtcctacggcctcgccgacaagctgtcc
aaaatgattccccccgatgtgggcatgaccctgcaaaaggctttcgaccaggaagagatc
ctgcgggaattcctcgaccacgacgatgagggccaggaaatctgggagatggccctgcaa
ctcgaaggtgtctcccgtaacgtgggcaagcacgccggtggtgtggttatcgcccccacc
aagctcaccgatttcgcaccgctctactgtgacgagactggcgcgggcctggtgacccag
ttcgataaaaacgatgtggaagatgcgggcctggtgaagttcgacttcctcggcctgcgg
acgctgaccatcatcgactgggccaagcgcatggtggacgagactcgtgcgcgagagggt
gaggagcccctggatattgccgcgctgccgctggacgatgaagaaaccttcaaaatgctc
aaacgggcagagaccacggcggtattccagctggaatcccggggtatgaaggacctgatc
aagcgccttcagccggacaacctggaagatatgatcgccctggtggccctgttccgtccg
ggtccgctgcaatcgggcatggttgatgactttattaaccgtaagcacggtcgcgcccag
gtggcctacccggatgccaaataccagcatgaaaaactgcaaccgatcctggagcccact
tacggggttattgtttaccaggaacaggtgatgcagatcgcccaggagttggcgggctat
accctcggtggcgccgacctgttacgccgggcgatgggtaaaaagaaaccggaggaaatg
gccaaacagagggccacttttgaaaatggggcaaaagagcaaggaattgaccccgaactt
gcgattaagatcttcgacctggtagagaagttcgcaggctatggttttaacaagtcgcac
tctgcggcttacgcactggtgtcataccaaaccgcttggctgaaagcgcactatcccgcc
cagtttatggcggcgaccatgtcttcggatatggataagaccgataaggtggtgaccttt
atcgaagagtgccgagccatggagctggtactggtgccgccggatgtgaacctgggtagc
ttccagttctcggtggatatcgacaatcgcattatctacggtctcggtgcgattaagggc
ctgggtgaaggtccgattgaaaatattattgcggcgcgggaagagggcggcccctttacc
gacctgttcgacttctgctcgcgggttgacccacgcaaggtgaacaagcgcgcgctggag
gcgctggtgcgctcaggggcactggacagcataggcccggataccaatggtgccgacgga
ttggattactcccgcgctgtgctgtttaacgcgctggatgaagcggtaaaagcggcggaa
cagcaaaaggccaatgccaatgcgggcatgatggacctgtttggcgaagtggtgccccag
gcatccgaaggtgatgtgtacgaggatttccgccgcacacgctgctggagtattcgcgag
cgcctggaaggcgaaaagaataccctgggcctgtatctcaccgggcacccgattgatgag
tatgccggtgagttacaacacctggtgaaggcgcgaatcgccgatttgaaacccggccgg
gaatcgcaaaaagttgcgggcctggtggtggcgatgcgggtaatgaaaacaaaacgcggt
gattccatggctattgttaccctggatgaccgcagtggccgtattgaagcggccatgttc
agcgaggcctttggcgaacatagagacaagttggccaaagatgcattgctggtattggat
ggaccggttgccactgacgattacagcggcggcctgaagatgacagtaaacagcgtttcc
acgctcgatgagttgcgccagagccgggtgaccggggtgcgcttgcgagtggatagcggc
agtgtggcaccggggctggccaagcggctggccgcttgcctgcaaccctataccggtggt
cagtgcggggtgagccttgaggtttcccgccacgatgcccggggcttgtaccgactgccg
ccgcagtggaacgtagaaccaaacgaccagatggtccagtctctcagggaactgttggga
cgtgagcaggtggcgcttcaatacgcacaacggcgttaa
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