Microbulbifer sp. CNSA002: ACG1BZ_07395
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Entry
ACG1BZ_07395 CDS
T11270
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcns Microbulbifer sp. CNSA002
Pathway
mcns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACG1BZ_07395 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcns03019
]
ACG1BZ_07395 (recQ)
03400 DNA repair and recombination proteins [BR:
mcns03400
]
ACG1BZ_07395 (recQ)
Enzymes [BR:
mcns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACG1BZ_07395 (recQ)
Messenger RNA biogenesis [BR:
mcns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACG1BZ_07395 (recQ)
DNA repair and recombination proteins [BR:
mcns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACG1BZ_07395 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
DNA_pol_A_exoN
ResIII
Motif
Other DBs
NCBI-ProteinID:
XNW49080
LinkDB
All DBs
Position
complement(1653516..1655321)
Genome browser
AA seq
601 aa
AA seq
DB search
MNSPQHILEHVFGYTDFRDPQKAVIDTLVAGNDALVLMPTGGGKSLCYQIPALARPGCGV
VISPLIALMQDQVEALQEAGIRAAYLNSSVAYDEIQAIESQLLHGELDLLYLAPERLLQP
RTLSLLQRVELSLFAIDEAHCVSQWGHDFRADYLQLNCLHEQFPRVPRIALTATADKRTR
AEIARRLDLEEARHFVSSFDRPNIQYRIEPKDNQRRQLLQFLQNGHQGNAGVIYCLSRAK
VENTAEWLSQQGFTALPYHAGLPAETRAEHQRRFLREEGVIVVATIAFGMGIDKPDVRFV
VHLDLPKSIEAYYQETGRAGRDGGASVALLLYGLEDVVKIGQMVESSEGSEEHKRQERSR
LNAMLGLCEITSCRRQALLDYFAEPLDNPCGNCDTCLEPPATWDASEAAVKLLSCVYRTG
QRFGASHVIDVLRGSENEKVRKFEHDQLSTHGIGKDLSAAEWRAVVRQLIVRGYLEVEGE
FQGLRLTEICRPLLRREETLNLRKLPPKAARSQSRDSRSLDDLSPENQVLWEALRNCRKQ
LAEERGVPPYVVFHDATLRGMVQAHPQTHSELLAVSGVGDSKLERFGDAFLAVLRDFPKH
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaattccccacaacatattctcgaacacgtttttggctataccgatttccgcgatcct
caaaaagcagttatcgacacactggtagccggcaatgatgccctggtattaatgcccacc
ggcggtggtaaatccctgtgctaccagattcccgccctggcgcgccccgggtgtggagtt
gtaatctcccccctgattgccctgatgcaggaccaggtagaagctcttcaggaagccggc
atccgcgccgcttacttgaattcatcagtggcctatgacgaaatccaggcaatcgaaagc
cagctattacacggtgagctggatctcctctatctagcccctgagcggttgctacagcca
cgaaccctgtcattactgcaacgggtagaactgtcgctgtttgccattgatgaagcccac
tgtgtttcccaatgggggcatgactttcgcgccgactatctgcaactcaactgcctgcac
gagcaattcccccgggtaccccgtattgccctgacagcgacagcagacaagcgcacccgt
gcagaaattgctcgccgcttggacttggaagaggcccgccactttgtcagcagcttcgac
cgccccaatatccagtaccgcattgagcccaaggacaaccagcgccgccaactgctgcaa
ttcttacagaatggacatcagggcaacgccggggttatttactgtctgtcccgagccaaa
gtggagaacactgcggagtggttgagccagcagggcttcactgccctgccctatcacgcc
gggctacccgccgagacccgcgccgagcaccagcgccgcttcctgcgtgaagagggtgtc
attgttgtcgccacaattgcatttggcatggggattgataagccggatgtgcgtttcgtt
gttcacctggacctacccaaaagcatcgaagcctactatcaggaaacgggccgtgcgggc
cgcgatggtggggcctcagttgctttactcctctacggtctcgaggatgtggtaaagatc
ggccagatggtggagtcctcagagggcagcgaagagcacaagcgccaggaacgcagccgc
ctgaatgccatgctcgggctgtgtgaaatcaccagctgccgccgccaggccctgctggac
tattttgcggaaccactggacaacccctgcggcaactgtgatacctgcctggagccacct
gccacctgggatgccagtgaggcagcggtaaaactactctcctgtgtctatcgcaccgga
cagcgctttggcgccagccacgtgatcgatgtactgcgcggctccgagaacgagaaagtc
cgcaaattcgagcacgaccagctctccactcatggcatcggcaaagacctgagcgcggcc
gaatggcgggcagtcgtgcggcagctgattgttcgcggctacctggaggtcgagggagaa
ttccaggggctgaggctcactgaaatttgtcgcccgctgctgcgccgggaagagactctc
aacctgcgcaagcttcccccgaaagcagcgcgctcgcagagccgtgacagtcgcagtctg
gatgatctcagcccagaaaaccaagtgctttgggaagccctgcgcaactgtcgcaaacag
ttggcagaagagcgcggcgtgccgccttatgtcgtcttccacgatgcgaccctgcgcggc
atggtacaagcccacccacaaacacacagcgagctattagcggtttccggcgttggagac
agtaagctcgaacgcttcggcgatgcatttttagcggttctcagggattttcccaaacac
gaataa
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