Microbulbifer sp. CNSA002: ACG1BZ_12440
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Entry
ACG1BZ_12440 CDS
T11270
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mcns Microbulbifer sp. CNSA002
Brite
KEGG Orthology (KO) [BR:
mcns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcns03009
]
ACG1BZ_12440 (dbpA)
Enzymes [BR:
mcns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACG1BZ_12440 (dbpA)
Ribosome biogenesis [BR:
mcns03009
]
Prokaryotic type
rRNA helicases
ACG1BZ_12440 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
Helicase_C_2
P-loop_SecA
Terminase_3
Motif
Other DBs
NCBI-ProteinID:
XNW45591
LinkDB
All DBs
Position
2791173..2792561
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AA seq
462 aa
AA seq
DB search
MTAPFSDLPLNPALLKNLASLNYKSMTEVQAKTLPIILDGKDVIAQAKTGSGKTAAFGLG
VLHRLNVSRFRIQSLILCPTRELADQVAQELRRLARAIHNIKILTLCGGMPFGPQIGSLA
HGAHIIVGTPGRIEEHLRKGTLSLEHVDTLVFDEADRMLDMGFQDVIDTILAQVPTGRQS
LLFSATYPGEIEKLSARVMQKPVMVKIDSAHSDKVIEQRFYRTESFEDRLEMTRRVLLND
KPVNTLVFCNTKRETDEVANDLKQAGFNVLALHGDMEQRQRNETLIRFANGSASILVATD
VAARGLDIDKLDAVINFHIAKDPEVHTHRIGRTGRAGERGCAYSFFAEKEGHKLVRMDLT
QDPLSDPDTPPPASILSEPPFQAPMATLQIDGGKKQKVRPGDILGALTGGDRPINGKDVG
KINVLDMTAYVAIKRNVASQALKKIENGKLKGRKFRVRRIRG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcacctttttccgatctccccctaaaccccgccctgctgaaaaacctggcgtca
ctcaactacaagtccatgaccgaggttcaggccaaaacgcttccgatcattcttgacggc
aaggacgttatcgcccaggcaaaaaccggttccggtaaaacggccgccttcggtttgggg
gtgctgcaccggctcaatgtcagccgctttcggattcaatcgctgattctgtgcccaaca
cgggaattggcagaccaggttgcgcaggaactacgccgactggcacgagcaattcacaac
ataaagattctgactctctgcggcggcatgcctttcggcccgcagatcggctccctggcc
catggagcccatatcatcgttggtactccaggacgtatcgaagaacacctgcgcaaagga
acactctccttagagcatgtcgatacgctggtctttgacgaagccgaccgaatgctcgat
atgggattccaggacgttatcgacactattctggcgcaggtgccaactgggcggcagtca
ttactattcagcgctacctaccccggtgaaattgaaaagctcagcgcccgagtgatgcaa
aaaccggtgatggttaaaatcgattctgcccatagtgacaaggtgatcgaacaacgcttt
tacagaactgagagtttcgaggatcgcctggagatgactcggcgtgtcctgctcaatgat
aaaccagtcaataccctggttttctgcaacaccaaacgcgaaaccgatgaagtagccaat
gatctgaaacaggctggcttcaatgtcctcgccctgcatggtgatatggagcagcgccag
cgcaatgaaaccctgattcgcttcgccaatggcagcgcttcaattctggtggccaccgat
gtagcggcacgcggtcttgatatcgacaagctggatgcggttatcaactttcatatcgcc
aaagatccggaagttcatacccatcgcataggacggacaggccgcgccggtgagcgcggt
tgcgcttactccttttttgctgaaaaagagggccacaaactggttcgtatggacctaacc
caggacccactatccgatccagatacaccgccacccgccagcatattaagtgaaccccct
ttccaggcaccgatggccactcttcaaatcgatggcggcaagaagcaaaaggtccgcccc
ggcgatatcctcggtgccctaaccggcggcgatcgcccgattaacgggaaagatgttggc
aagatcaacgtactggacatgaccgcctatgttgcgattaaacgcaatgtagcatctcaa
gctcttaagaaaattgaaaacggaaaattgaaagggcgtaaattccgcgtgcggcgtatt
cgaggctaa
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