Microbulbifer sp. CNSA002: ACG1BZ_18970
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Entry
ACG1BZ_18970 CDS
T11270
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mcns Microbulbifer sp. CNSA002
Pathway
mcns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACG1BZ_18970 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcns03019
]
ACG1BZ_18970 (pcnB)
Enzymes [BR:
mcns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACG1BZ_18970 (pcnB)
Messenger RNA biogenesis [BR:
mcns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACG1BZ_18970 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
DUF2204
Motif
Other DBs
NCBI-ProteinID:
XNW46839
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All DBs
Position
4259127..4260503
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AA seq
458 aa
AA seq
DB search
MAAVNIDSRMLNNLISSIKRWRKPASKGPRVIARNDHSISRREISRAALTVMKRLQDAGY
QAYIVGGGVRDLMLGGHPKDFDVATDATPEQAKVLFRGARIVGRRFRILHARIGREVIEV
TTFRGHHSDGETHEAKQSEHGMLLRDNVYGDLESDAMRRDFTVNALYYTTKGFEIHDYTG
GVEDIEKRLIRMIGSPEVRYKEDPVRMLRAVRFAAKLDFTIEGTTEAPLHELAPLLRNIA
PARLFDEILKLLMSGHGERTFELLRQYQLWQHLFPDNAAQIEANNAALKLSQQALRNTDQ
RIRADMRVTPAFLYAALLWPAVSTEQQKLIAKGTPPAPALAQAAQKVTSSQLAHTAIPKR
FSIPMREIWDLQQRLPQRGGSRAQRLQEHPRFRAAYDFLLLREESGEIEAGLGKWWTDFQ
QADDEQRQQMVRKLQRTGSGGRRNRNSRGRRRKPRAEQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtcaacatagacagccgtatgctcaacaacctgattagtagtatcaaacgc
tggcgcaagccggccagtaaaggccccagggttatcgcccgcaacgaccacagcatctcg
cgccgagaaattagccgcgcggccttaacagttatgaagcgccttcaggatgccggatac
caggcgtatatcgtaggtggaggtgtacgcgacctgatgctcggcggtcaccccaaggat
tttgatgtggccaccgacgccactccagagcaggccaaggtgctttttcgcggcgcacgc
attgtcggtcgtcgctttcgcatcctgcacgcccgtataggccgtgaagttatcgaagtg
actaccttccgcggtcaccacagcgatggcgagacccacgaggccaagcagtccgaacac
ggtatgctgctgcgtgacaatgtctatggcgacctggaaagtgatgccatgcgtcgagat
ttcacagtcaacgcgctctactacaccaccaaagggtttgaaatccacgactacaccggc
ggtgtcgaggatattgaaaagcgcctgattcgaatgatcggctccccagaggtccgctac
aaggaagacccggtgcgcatgctgcgcgcagtgcgcttcgccgccaagttggatttcact
attgaaggcacgacggaagctcccctgcacgagctggcgccactgttacgcaatattgcc
ccggctcgtctgttcgatgagattctcaagctgctgatgagtggccacggagagcgcacc
tttgagctgctgcgccagtaccagctctggcaacacctgttcccggataacgccgcacaa
attgaggccaacaacgcggccctgaaactatcccaacaagccctgcggaacacggaccaa
cgtatccgcgccgatatgcgtgttaccccagcgttcctctacgccgccctactctggcct
gcggtgagcaccgagcaacaaaagctgattgccaagggcaccccaccagcgccagcgctg
gcccaagcggcacaaaaagttaccagttcacagctggcccacaccgctattcccaagcgc
ttctcaatccccatgcgggaaatctgggacctgcaacagcgcctgccccagcgcggtggc
agccgggcccagcgcttacaggagcacccccgtttccgcgccgcctacgacttcctgttg
ctgcgggaagaaagtggcgagattgaagcgggcctgggcaaatggtggaccgacttccaa
caggccgacgatgagcagcgccagcaaatggtgcgcaagctacagcgcacaggcagcggt
gggcgccgcaaccgtaactctcgcggccgccgtcgcaagccgagagcagaacagtaa
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