Microbulbifer sp. CNSA002: ACG1BZ_19020
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Entry
ACG1BZ_19020 CDS
T11270
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcns Microbulbifer sp. CNSA002
Pathway
mcns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACG1BZ_19020 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcns03019
]
ACG1BZ_19020 (pnp)
03016 Transfer RNA biogenesis [BR:
mcns03016
]
ACG1BZ_19020 (pnp)
Enzymes [BR:
mcns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACG1BZ_19020 (pnp)
Messenger RNA biogenesis [BR:
mcns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACG1BZ_19020 (pnp)
Transfer RNA biogenesis [BR:
mcns03016
]
Prokaryotic type
tRNA degradation factors
ACG1BZ_19020 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
KH_KhpA-B
S1_2
KH_PNO1_2nd
KH_NusA_2nd
DUF3016
Motif
Other DBs
NCBI-ProteinID:
XNW46849
LinkDB
All DBs
Position
complement(4268868..4270991)
Genome browser
AA seq
707 aa
AA seq
DB search
MNPVSKTFQYGQHQVTIETGRIARQATGAALVSMGETVVLCTVVGAKEAKPDQGFFPLSV
HYQEKAYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVMCTVLSAE
KDMDPDIAAMIGTSAALSVSGIPFAGPIGAARVGYTQQDGYLLNPGYEALKTSELDMVVA
GTKDAVLMVESEAQELPEDIMLGAVLYAHQEMQAIIKVCEELKAEAGKPQWDWQAPAENT
ELKAALDAQFGGKVAEAYRITNKQERSTRLAELRSEAAEALATEEISADLVKSYFGKLEK
KLVRGAVVRGEPRIDGRDSKTVRSIAVEVGALPKSHGSALFTRGETQALVVATLGSTGDA
QIIDALEGERKDYFMLHYNFPPYSVGEAGRVGATGRREIGHGRLARRGIAAVLPSPDSFP
YTVRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEEEGYAVLTDIL
GDEDHLGDMDFKVAGTASGVTALQMDIKIEGITEEIMETALEQALHARLHILAEMNKVID
SSRTTVNENAPRYATLKIHPDKIRDVIGKGGATIRSITEETGASIDIEDDGTIKVFGEDG
ESLEAAVTRIEEITAEAEIGAIYEGTVVRIVDFGAFVNFLPGKDGLVHISQIAEERVNAV
TDYLSEGEKIKVKVLDVDQRGRIKLSIKEAKADAAAAEEAKQASDEA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaagcaaaactttccaatacggacaacaccaagtcaccatcgagaccggc
cgtatcgcgcgccaggctaccggtgctgccctggttagcatgggagagactgttgtcctg
tgtactgttgtcggcgctaaagaagccaagccagatcagggcttcttcccgttgtccgtg
cactatcaagaaaaagcctacgcggctggcaaaattcccggtggcttcttcaagcgtgaa
ggccgcccgtctgaaaaagaaaccctgacttcccgtctgatcgatcgcccgatccgcccg
ctgttcccgaacggctttatgaacgaagttcaggtgatgtgtactgttctctccgctgag
aaggacatggacccggatatcgctgctatgatcggcacctccgcagcgctatctgtttcc
ggtattcctttcgctggcccaatcggtgctgcgcgtgtgggttacacccagcaagacggc
tacctgctgaacccgggctacgaagctctgaagacctccgagctggacatggtcgttgcc
ggtaccaaagacgccgtactgatggtggagtccgaagcccaggagctgccggaagacatc
atgctgggtgccgtactctacgcacaccaggaaatgcaggccattatcaaggtttgtgaa
gagctgaaagcggaagcgggcaagccccagtgggactggcaggctccggcggaaaacacc
gagctgaaagctgccctggacgctcagtttggcgggaaggttgccgaagcctaccgcatc
accaacaagcaagagcgcagcacccgcctggcggaactgcgcagcgaagccgctgaagcc
ctggctactgaagaaattagcgctgatctggtaaaaagctacttcggcaagctggagaag
aagctggtgcgtggcgctgtagtgcgtggcgagccccgtatcgacggtcgcgacagcaaa
actgtacgttcgatcgctgtggaagttggcgctctgcccaagtcccacggctctgcgctg
ttcacccgtggtgagacccaggctctggtagtggctaccctcggttccactggcgatgca
cagatcatcgacgccctggaaggtgagcgcaaagactactttatgctgcactacaacttc
cctccctactctgtaggtgaagcgggtcgtgtaggtgctaccggtcgtcgcgaaatcggt
cacggccgcctcgctcgtcgcggtatcgctgcagttctgccgagcccggacagcttcccc
tacaccgtgcgtgtagtttccgagatcactgaatccaacggttccagctccatggcttcc
gtctgtggttccagcctggcgctgatggatgcgggtgttccgctgaaggcaccggtagcc
ggtatcgctatgggtctggtgaaggaagaagaaggctacgcggttctgaccgatatcctc
ggtgacgaggaccacctcggcgatatggacttcaaagtagcgggtaccgcctctggtgtg
accgcgctgcagatggacatcaagatcgaaggtattaccgaagagatcatggagaccgct
ctggagcaggctctgcacgcgcgtctgcatatcctcgcggaaatgaacaaggtgatcgac
tcttcccgtaccaccgtgaatgagaacgcaccgcgctacgcgaccctgaagatccatccg
gataagatccgcgacgtgatcggtaagggcggtgcgactatccgctccatcactgaagag
accggcgcctccattgatatcgaagatgacggcactatcaaggtcttcggtgaagacggt
gagagcctggaagcggcggtaacccgcatcgaggagatcactgcggaagctgagattggc
gctatctacgaaggtaccgtggtacgtatcgtagacttcggtgcgttcgttaacttcctg
ccgggcaaagacggtctggtgcatatctcccagatcgctgaagagcgcgtaaatgccgta
actgattacctgagtgaaggtgagaagattaaggttaaagtactcgacgttgaccagcgt
ggacgtatcaagctttctatcaaggaagccaaggccgatgcagctgccgctgaagaagcc
aagcaagcttccgacgaagcttaa
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