Mycoplasmopsis columbinasalis: NCTC10184_00065
Help
Entry
NCTC10184_00065 CDS
T07140
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcob
Mycoplasmopsis columbinasalis
Pathway
mcob03420
Nucleotide excision repair
mcob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10184_00065 (pcrA)
03430 Mismatch repair
NCTC10184_00065 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcob03400
]
NCTC10184_00065 (pcrA)
Enzymes [BR:
mcob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10184_00065 (pcrA)
DNA repair and recombination proteins [BR:
mcob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10184_00065 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC10184_00065 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
ADDB_N
AAA_11
Glyco_hydro_106
ResIII
DUF3305
Motif
Other DBs
NCBI-ProteinID:
VEU77851
UniProt:
A0A449B9J2
LinkDB
All DBs
Position
1:complement(113463..115712)
Genome browser
AA seq
749 aa
AA seq
DB search
MARKEKILQDLNPDQAEALNYFSGPLRIIAGAGSGKTRVLTRKIAYLINVLGIVPSEILA
LTFTNKAANEMSERVMQYSSYTENPAENVQKPLICTFHTFCSKILRVEADKLGFGSDFQI
VDDVDKKGILTNIYKNHHLSPQEVKFSRIFNIFSMAKNLNYTSDELVQAINESENDPDVI
STNKLIGQMFDEYNEFLQQKNCFDFDDLIIKVHELFKTNAEVKDKWASKFEFILVDEFQD
TSKMQYEIIKDLCSKGAQLTIVGDPDQTIYSWRGADVDLILNFDQNFPNVHTIVLNTNYR
STQTILNAANNLIKHNKKRFSKDLVTDNVGGEDIEFYHAFNPEAEARWVVQKINELKKKK
IQLKNIAIFYRSNYYSRPFEEELMRENINYKVFNGQKFFQRKEIKDVLSYLRVIYDFSDV
SLLRIINTPARKIGDATLAKLETFAADKGKSLLDALITYNKELPVSTTVRNEIIKFLNAI
LRHNKALKKYSIYETLNSLLKEVGYIEYIKNDPGLKNSGEDNIKELLNSIRAWEKNNAPT
KGIKEYLEEISLFSAGDEVDTGTNYVTLMTVHSAKGLEFDNVFLVGMSDQVFPHRRSLQN
KNPEALEEERRLAYVAITRARKRLFVSDSRGYTENNEAKNPSFFITEMGLDVEALITKNQ
DVNIDFSEISEDKIKEINKHIIPGDIIAHIVFGEGTVLEVDPDKIKVEFKDKKHGIRSLS
KNHSAMRLLKSQFLADLNTTSSDTKDEIK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaaagaaaaaattttacaagatttaaaccccgatcaagctgaagcactcaat
tattttagcggacctttaagaattattgcaggagcaggaagtggcaaaacgcgtgtttta
acgcgcaaaattgcttatttaattaatgttttaggtattgttccttctgaaattcttgct
ctgacttttaccaacaaagcagccaacgaaatgagcgagcgtgtgatgcaatattctagt
tatacagaaaatcctgctgagaacgtccaaaaacctttaatttgtacttttcacacattt
tgttcaaaaattttgcgtgttgaagctgataaattaggttttgggagcgactttcaaatt
gtggatgatgttgataaaaaaggaattttgactaacatttacaaaaatcaccatttatca
ccacaagaagtgaaatttagtcgaatttttaacattttctcgatggctaaaaatcttaac
tacacaagtgatgaacttgtgcaagcgattaatgaaagtgaaaatgatcctgatgtaatt
tcgacaaacaaattaatcggacaaatgtttgacgaatataatgaatttttgcaacaaaaa
aattgttttgactttgatgacttaattattaaagtgcacgaattattcaaaactaatgct
gaagttaaagataagtgagcaagcaagtttgaattcattttagtagatgaatttcaagat
acctcgaaaatgcagtatgaaattattaaagacttatgttcaaaaggtgcgcaactaaca
attgttggcgatcctgaccaaactatttactcatgacggggcgcagatgttgatttgatt
ctcaactttgaccaaaacttccccaatgtacatactattgtcttgaacaccaactatcgc
tcaacacaaaccattttaaacgcagccaacaatctcattaaacataacaaaaaacgtttt
tccaaagatcttgttactgacaatgtcggtggcgaagacattgagttttaccatgccttc
aacccagaagccgaggctcggtgagtagtgcaaaaaattaacgaactcaaaaagaaaaag
attcaactgaaaaatattgctattttttaccgttcaaattattattcacgtccatttgaa
gaagaattaatgcgcgagaatattaactacaaagtttttaacggtcaaaaattcttccaa
cgcaaagaaattaaagatgttttgagttatttacgtgtcatttatgactttagtgacgtt
tctttgttacgaattattaacacgccagcacgaaaaattggtgatgcaactctggcaaaa
ctagaaacttttgctgctgataaaggaaaatcacttttagatgctctgattacttacaac
aaagaattgccagttagcacaacagtacgaaatgaaattattaagtttttaaacgcaatt
cttagacataacaaagcactcaaaaaatattcaatttatgaaacacttaattcgttgcta
aaagaagttggttatattgaatatattaaaaacgatccaggcctaaaaaatagtggtgaa
gacaacatcaaagagttactcaattcaattcgtgcttgagaaaaaaacaatgctccaacc
aaagggattaaagagtatttagaagaaatttcactcttttcagctggtgacgaagttgac
actggcaccaattacgtaacattaatgacggttcattcagctaaaggtttagaatttgac
aatgtctttttagtggggatgagtgaccaagtatttcctcatcgtagatcattgcaaaat
aaaaatccagaagcacttgaagaagaaagacgtcttgcttatgtggctattacgcgcgct
cgtaagcgtttgtttgtaagtgatagtcgtggatatactgaaaataatgaagctaaaaat
ccatcatttttcattaccgaaatgggacttgatgttgaagctttgattactaaaaatcaa
gatgttaacattgatttttcagaaatttccgaagacaaaattaaagaaattaacaaacac
attattccaggtgacataatcgcacatattgtgtttggcgaaggcactgttttagaagtt
gatcctgacaaaattaaagtcgaatttaaagacaaaaaacacggcattaggagccttagt
aaaaatcattctgcgatgcgattattgaaatcacaatttctagctgatttaaacacaacc
agcagtgacactaaggatgaaattaaataa
DBGET
integrated database retrieval system
