Mycoplasmopsis columbinasalis: NCTC10184_00087
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Entry
NCTC10184_00087 CDS
T07140
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mcob
Mycoplasmopsis columbinasalis
Pathway
mcob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10184_00087 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcob03400
]
NCTC10184_00087 (nfo)
Enzymes [BR:
mcob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NCTC10184_00087 (nfo)
DNA repair and recombination proteins [BR:
mcob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC10184_00087 (nfo)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
VEU77874
UniProt:
A0A449B9N9
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All DBs
Position
1:complement(137074..137907)
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AA seq
277 aa
AA seq
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MIKLGSHVPFTKPKYLVGAAEYSLKNGANTMMIFLGAPQNNKRVSPTLYNTEEYLANFAA
KTPPIDVIVHAPYIINPANPLKQAYSVDFLVEEIERMNTFGAKYLVLHPGAYTTFAPEQA
LDTLAASLKMIIERTKDVVICIETMSGKGTEIGINFDQIKYLLTKVDDERVQVCLDTCHM
WDAGYNLKDYSEFKKTLKKYDLLKNVKVIHLNDSKNELNSHKDRHENIDQGKIKLATLAK
FVHDPDFANIPIILETPIPDSGQIYDQEIAMLLKHKF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgattaaactcggctcacacgtgccttttaccaaaccaaaatatttagttggtgcagca
gaatatagccttaaaaatggcgcaaacacaatgatgatctttttaggagcgccgcaaaac
aataagcgagtaagccccacactttacaatacagaggagtatttagctaattttgctgca
aaaacacccccaattgatgttatagtgcatgctccttatattattaacccagcaaatcct
ttaaaacaagcttattcagtggattttttggttgaagaaattgagagaatgaatacattc
ggagcaaaatatttagttttgcatccaggcgcttatacaacttttgctcccgaacaagcc
ttagatactttggctgctagtttaaaaatgataattgaacgaacaaaagatgtggttatt
tgcattgaaactatgtcgggcaaaggtacagaaattggaattaatttcgaccaaattaaa
tatttgttaactaaagttgatgatgaacgtgtgcaagtttgtttagacacatgtcatatg
tgggatgctggctataatttaaaagactattcagaatttaaaaaaactttaaagaaatat
gacctattaaagaatgtgaaagttattcacttaaatgactcgaaaaatgaattaaattct
cataaagatagacacgaaaatattgaccaaggtaaaattaaattagcaacacttgcaaag
tttgtgcacgacccagattttgctaacattccaattattttggaaacacctattcccgat
tcagggcaaatttatgaccaagaaattgcaatgcttctcaagcataaattttag
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