KEGG   Mycoplasmopsis columbinasalis: NCTC10184_00155
Entry
NCTC10184_00155   CDS       T07140                                 
Symbol
rnjA
Name
(GenBank) hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mcob  Mycoplasmopsis columbinasalis
Pathway
mcob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC10184_00155 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcob03019]
    NCTC10184_00155 (rnjA)
Messenger RNA biogenesis [BR:mcob03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NCTC10184_00155 (rnjA)
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP RMMBL
Other DBs
NCBI-ProteinID: VEU77940
UniProt: A0A449B9R7
LinkDB
Position
1:complement(224940..226592)
AA seq 550 aa
MNHISIFALGGLDENEKNCYVLEWNEKIFIINAGTKIPINSTNGIDTLIPNFDYLVKNKD
RIQGIFISDVKSDTFSALPWLLMQIPNLKIYTSEFNKLMILDRLSKYRISNAAYKIFVLK
DVKKFDDIFIQPIDIAGSMPGCLGFDFITPDGDVLFMFNFVEGNLGIYGKLSFDSLAKNF
TKRKLLALVVDAGRVNLNGKAIEKIALPQSIKEVFLNAGPKERIIVSAYDEEMASIQQIL
DLAYKTKRPVVTYGKTYGQVFELIRNTYSKLNWPNAIDYRNANKIPNAVVLVTGSINRLF
SRFLRITEKNDVFLSLNANDNVLFLSPAVNGLEKLEALTLDEIAKVTSKIYDVSSSEFYR
HRPARQDIIDLVTKTKPQYVIPVEGLYRYLSDAQRYIAKECKMKENQILVLQNGRIAHFI
DGKLASSKGKVKEVGETIIDGYGIGDISSEVVMEREVLGREGVIVVSVLFDSKTKKLVSK
IQINFVGSISKEAKKDASELIKQVILKILEEEKFANIKELQNRARQVIKRKIFKNYDKEP
LVVVTFQQIS
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaatcatattagtatctttgctcttggcggtttagatgaaaatgaaaaaaactgctat
gttttggagtgaaacgaaaaaatatttattatcaatgctggaacaaaaattccgattaat
tcaaccaatggaattgacactttaattccaaattttgattatttagtcaaaaacaaagat
cgtatccaaggcatttttataagtgatgtcaaaagtgatacttttagtgctttgccatga
ttattaatgcaaattcctaatttaaaaatttacacttctgaatttaacaaattaatgatt
ttggatcgtttgtctaaatatcgtattagcaatgctgcatacaaaatttttgttctcaaa
gatgtgaagaaatttgatgacattttcattcaaccaattgatattgctggttcaatgcct
ggttgcttaggttttgattttattactccagatggtgatgtactttttatgtttaacttt
gttgaaggaaatttaggtatttatggcaagttaagctttgatagcttagccaaaaatttt
actaaacgtaaacttttagctttagttgttgatgctggtagagtaaatttgaatggcaaa
gcaattgaaaagattgctttaccacagtcaataaaagaagtttttttaaatgcaggacca
aaagaaagaattattgtaagtgcttacgatgaagaaatggcatcaattcaacaaattcta
gacttagcttacaaaacaaaacgtccagttgttacttatggcaaaacttacggtcaagtg
tttgaactaattagaaatacttatagtaaattaaattgaccaaatgctatcgattatcgt
aacgcaaataaaataccaaatgctgttgtgcttgtaactggatcaattaatcgtctcttt
agtcgttttctaagaattactgaaaaaaacgatgtctttttatcgttgaacgctaatgat
aatgtgctttttctttcgccagcagtaaatgggttagaaaaattagaagcgttaacactt
gatgaaattgctaaagttacttctaaaatttatgatgtttcttcttctgaattctatcgt
caccgtcctgcacgacaagacattatcgatctagtaaccaagactaaaccacaatatgta
attccagtcgaaggtctttatcgttatttaagtgatgcacaaagatatattgccaaagaa
tgcaaaatgaaagaaaatcaaattttagtgttgcaaaatggtcgaattgctcactttatt
gacggcaaattagcttcctcaaaaggaaaagtcaaagaagttggtgaaaccattatcgac
ggttacggaattggtgatatatcttctgaagtcgtgatggaacgtgaagttttagggcgt
gaaggtgtaattgtcgtgagcgttttattcgattctaaaactaaaaaactagtttctaaa
attcaaattaatttcgttgggtcgattagcaaagaagcaaaaaaagatgcttcagaatta
attaaacaagtaattttaaaaattcttgaagaggaaaaatttgctaatatcaaagaatta
caaaacagagcacgtcaagttattaaaagaaaaattttcaaaaattatgacaaagaacca
cttgtagtggtgacatttcaacaaattagctaa

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