Mycoplasmopsis columbinasalis: NCTC10184_00198
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Entry
NCTC10184_00198 CDS
T07140
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcob
Mycoplasmopsis columbinasalis
Brite
KEGG Orthology (KO) [BR:
mcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcob03016
]
NCTC10184_00198 (truB)
Enzymes [BR:
mcob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC10184_00198 (truB)
Transfer RNA biogenesis [BR:
mcob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10184_00198 (truB)
Prokaryotic type
NCTC10184_00198 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
VEU77983
UniProt:
A0A449B9X1
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All DBs
Position
1:279882..280748
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AA seq
288 aa
AA seq
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MFYLINKEKNVSSFQEIKKFGRQNQIKTLGHTGTLDPFATGLLLVATEDDTKLIQYIKNS
NKTYEVTIKFGYQSNTFDSDGEIINTSKNKVTADMLSEIKIWFETQTQQQPPIFSAKKIN
GQRAYHLARNNQTEAQIALKPIKITVSNVKILDFDEQAQELTVSLEVSNGTYIRSLANDL
GLFLQTFALAKELKRTKIADFTLAQMQNEKFLAVPTPQLQYPLYFLEEFEITQLKNGLTI
EAKHLENTQQIYFFIADKTKPDVILGVVQQCANQLKVKRLFGNRLTKY
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttaattaataaagaaaaaaatgtttcctcgttccaagaaattaaaaaattt
ggaaggcaaaatcaaataaaaacacttggtcacaccggtacacttgatccttttgccacc
gggttattactagttgctactgaagatgacacgaaactaattcaatacattaaaaattca
aataaaacatatgaagttaccatcaaattcggttatcaaagcaatacttttgatagcgac
ggtgaaattattaacacaagcaaaaacaaagtaactgctgatatgttgagcgaaatcaaa
atttgattcgaaacacaaactcaacaacaaccgcctatttttagtgccaaaaaaatcaat
ggtcaaagggcttatcacttggctcggaacaatcaaactgaagcgcaaattgcccttaaa
cctattaaaattactgtttcaaacgtgaaaattttagacttcgacgaacaagcacaagaa
ctaactgtttctttggaagtgtctaatggaacttatataagatctttagcgaatgattta
ggtttgtttttacaaacttttgccttagcaaaagaactaaaaagaacaaaaattgctgat
tttactcttgctcaaatgcaaaacgaaaaatttttagcagtaccaacgccacaattgcaa
tatccactttattttttagaagaattcgaaatcacgcaactcaaaaatggtttaactatc
gaagctaagcatttggaaaatactcaacaaatttatttttttatcgctgacaaaacaaaa
cctgatgtcattttgggggttgtgcaacaatgcgctaatcaattaaaagtcaagaggctt
ttcggaaatagattaactaaatactaa
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