Mycoplasmopsis columbinasalis: NCTC10184_00544
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Entry
NCTC10184_00544 CDS
T07140
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mcob
Mycoplasmopsis columbinasalis
Pathway
mcob03030
DNA replication
mcob03430
Mismatch repair
mcob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10184_00544 (polC)
03430 Mismatch repair
NCTC10184_00544 (polC)
03440 Homologous recombination
NCTC10184_00544 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcob03032
]
NCTC10184_00544 (polC)
03400 DNA repair and recombination proteins [BR:
mcob03400
]
NCTC10184_00544 (polC)
Enzymes [BR:
mcob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10184_00544 (polC)
DNA replication proteins [BR:
mcob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10184_00544 (polC)
DNA repair and recombination proteins [BR:
mcob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10184_00544 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol_A_exo1
HHH_3
tRNA_anti-codon
T2SSK
DUF655
TfoX_C
Motif
Other DBs
NCBI-ProteinID:
VEU78304
UniProt:
A0A449BAT5
LinkDB
All DBs
Position
1:662395..666873
Genome browser
AA seq
1492 aa
AA seq
DB search
MEKDAQTSLTIGEKTTSEQPNIAASADQKTRQQRFQKLCRHLNTNLNEMFPNTEITQLEM
HPDQSLFAKIKICDKMHFDEFIHFRNTFSTSTAVDISVKYEFDEKLYQKALIGDYLQNII
ETKSFFKWKVLLSSRPLVLLEKNADKFSMIFKVADQNLVNDTIAVTDKLESELHNCGFVN
LILRVEMIATESGEAEYETPANTISNEAAVKVLSQQQRNAQVKSAAKDKYSSPTFTKKRW
DNIAYQEINLKQIWELEDKSPVQVVGEIFDFEYKKLNNSSGKNHLYIISLTDFQNAVQIQ
LFLSEALTETEQKTLRIGNWISVKGKLAIKVRQYNEQRIIYGDSFSEFETPNIRPMDNMP
PERKRIELHVSSKMSTMDALIDPEDIIKKAAEFKMPAVAIMDLDGCQGYPKFYTTAKKLG
VKPLMGTSFTTIERGHEAVWGARKFEKTTLRELAYVAFDIETTSLYARFGEIIEYGWADI
KNNLKIEKLNQFFIQAKEPLSVFTTNLTGIKQEDVLSGLTIDKAFDEIYDNLNGKIAIAH
NAKFDYYYIKQKCLEYKKPFPEFTIIDTLKVSGILFPNDKRHNLNALAKRLDVEYQAEVA
HRADYDANVLANVWVKLVGILEEKGITTLDQLAKLVSQDAWKKERGFEVSTLCKNNEGLK
EQFKLVSKALTDQYWDSAKLFWDDLQETKNLLIGSGALRGRLLEEYFYGSQDTFEAILDR
FDYIEVPAPAVFKHFVEYGDLTWDQVHSTLKDIILTAKQKGKLVVAIGDVKYLNPFDQYI
YKIVVYAKGIANSRHYLFNFEKAKQNELKIPQQHFFTTEEMLTQFAFLQDEALIEEIVIT
NTHKIADLCEEVEVIKKGLFKPEFDDSDHKLRALVYENAHKLYGEKLPEFIEQRIESEIE
PIIKFGYSVIYWISHVLIKMSTDRGYIVGSRGSVGSSFVAFLSDISIINPLPPHYICQKC
KLFELANLPKITSGFDLPKRNCPNCNVLMHRDGQLIPFETFLGFNAEKVPDIDLNFSGDV
QGEIHQEVRNLFGEFNTFRAGTISTVASKTAYGYVKAFMEETGEHADELFVNYLAKQIEG
IKRTTSQHAGGIIIIPKEKEIYDFTPLNFPAGETESTWKTTHFDYKAIHDNLLKLDILGH
DNPTIFKMLETMTKFKTAQIPYDDPDVIKLFCSPEPMGIKSEQIDNEPTGALGLPEYGTK
FVRKILTVAAPKSFADLVSLCGLSHGTNVWLNNAEDLILKNNLTLSDVVSCRDDILVKLM
ALNVPRSQAFEIMEKVRHAKKTLSAEDEALLVKHNVPQWQIESMKKIQYMFPKAHAVAYA
QMAWWTAYYKLYFPLEFYAVYFSIRTDVLDLDNMVDMKFGTKAKMKLHQIKRDEQNRSIS
TTDEKLLPIFEICQELYARGYYIDNVSLTNSEAVTWKVDHQRGCLIPPFNAVKQLGEAVA
NSIVKAREEKPFKSIEDFTKRTLTNSSLIKKLEEMNVFENLDQTNQMQLNIL
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatgcacaaacttcacttactattggtgaaaaaactacaagtgaacagcca
aacattgctgcatcagcagaccaaaaaacaagacaacaacgttttcaaaaactttgtcgt
catttaaatactaacttgaatgaaatgttcccaaatactgaaattacgcaacttgaaatg
catccagatcaatctcttttcgcaaagattaaaatttgtgacaaaatgcattttgatgag
tttatacatttcagaaatactttttccacttccacagcagttgatatttcggttaagtat
gaatttgacgaaaaactctatcaaaaagctcttatcggcgactacttacaaaatataatt
gagaccaaaagtttttttaaatgaaaggtactcttaagtagtagaccacttgttttacta
gaaaaaaatgctgataaattcagtatgatctttaaagttgctgatcaaaatttagttaat
gacactatagctgtaaccgataaattagaaagtgagttacataattgcggatttgtaaat
ttaatacttagagttgaaatgatagccactgaatctggcgaagctgagtatgaaacacca
gccaacacaatttctaacgaagccgcagttaaagttcttagtcaacagcaaagaaatgcg
caagtaaaatctgctgcaaaagataaatattcttcgccaacttttactaaaaagcgttga
gataacattgcttaccaagaaattaatttgaaacaaatttgagaattagaagataaatcg
cctgtgcaagttgtaggtgaaatctttgactttgaatacaaaaaacttaataactcttca
ggtaagaatcatttatacattatttctttgactgattttcaaaatgccgtacaaattcaa
ttatttttatcagaagctttaaccgaaactgagcaaaaaactttacgaataggtaattga
atttctgtcaaaggcaaacttgctattaaagttcgtcaatacaatgaacaaagaattatt
tatggtgattcttttagtgaatttgaaacccccaacattcgaccaatggacaatatgcct
ccggaaagaaaaagaatcgaattacatgtaagttccaaaatgagcacaatggacgcgtta
atcgaccctgaggatattattaagaaagcggctgaatttaagatgccagcagttgccatt
atggacttggatggttgccaaggttatcctaagttttacacaacagcaaaaaaactaggt
gtaaaaccattgatgggaacatcttttaccacaattgaacgtggccatgaagctgtttgg
ggtgctagaaagtttgaaaaaacaactttgcgtgagcttgcctatgttgcttttgacatt
gaaaccacttccttatatgctagatttggtgaaattattgagtatgggtgagctgatatt
aaaaacaatttgaaaattgaaaaactaaaccaattttttattcaagctaaagaaccgtta
tcagtttttacaactaatcttaccggtattaagcaagaagatgttttgagcggacttaca
attgacaaagcatttgatgaaatttatgacaatttgaatggcaaaattgctatcgcccac
aacgcaaaatttgactactattacataaaacaaaaatgtttggagtacaagaaacctttt
cccgaatttacaattattgacacattgaaagtttctggaattttgtttccaaatgacaaa
cgccacaatttgaatgccttagcgaaaagacttgatgttgaatatcaagccgaagtagct
caccgggctgattatgacgccaacgttttagctaatgtgtgagtaaaattggttggtatt
ttagaagaaaaaggaattactacacttgatcaattagctaagttagtttcacaggatgct
tgaaaaaaagaacgtggttttgaagtaagtacactttgcaaaaataatgaaggactcaaa
gaacaatttaaattagtaagcaaagcattaacagatcaatattgagattcagctaaatta
ttttgagatgatcttcaagaaacaaaaaatcttttgattggttcaggcgctttacgcggt
aggctgcttgaagaatatttttatggatcgcaagacacttttgaagcgattttagatcgt
tttgattacatagaagtgcctgcacctgcggtgtttaaacattttgttgaatatggagat
ttgacttgagatcaagttcattcaacactgaaagacatcattctcacagcaaaacaaaaa
ggcaaacttgtggtggcaattggcgatgtaaaatacttgaatccattcgaccaatatatc
tataaaatagttgtctatgcaaaaggtatcgctaactcaagacactatttatttaacttt
gaaaaagcaaaacaaaatgagttaaaaattccacaacagcactttttcactacagaagaa
atgcttacacaatttgcttttttgcaggatgaagctttaattgaagaaattgtaattaca
aacacacacaaaattgctgacctgtgtgaagaagttgaggttatcaaaaaaggtcttttt
aaacctgaatttgatgattcagaccacaagttgcgtgcgttagtttacgaaaatgcacac
aaactttatggcgaaaaattaccagaattcattgaacaacgaattgaaagtgaaattgaa
ccaatcattaaatttggttactcggtgatttattgaattagtcacgttcttattaaaatg
tcaactgaccgtggttacatcgttggttcacgtggttcagttggttcctcgtttgttgct
tttttaagtgatattagtattatcaaccctttaccgcctcattatatttgtcaaaagtgt
aagttgtttgaattagctaatttgccgaaaattacctcaggttttgatttaccaaaacgt
aactgcccgaactgtaacgtcttaatgcatcgtgatgggcaattgattccttttgaaaca
tttctagggtttaacgcagaaaaagtacctgacattgaccttaacttttcaggtgatgtg
caaggtgaaattcatcaggaagtacgtaatttgtttggcgaattcaacacgtttagagct
ggaacaatttcaacagttgcttcgaaaacagcatatggctatgttaaagcatttatggaa
gaaactggtgaacacgctgatgaattgtttgttaattatttagccaaacaaatcgaaggt
attaagcggacgacttcccaacacgccggcggcattatcattattccaaaggaaaaagaa
atttacgattttacaccactcaatttcccagcaggtgaaactgagtcaacttgaaaaaca
actcactttgactacaaggcaattcatgacaatttattgaaacttgatatcttaggacat
gataatccaaccattttcaagatgctggaaacaatgaccaagtttaaaactgcgcagatt
ccttatgatgatcctgatgttattaagttattctgttcaccagaaccaatggggattaaa
tcggaacaaattgacaatgaaccaactggtgctttgggactacctgaatatggcaccaag
tttgttcgaaaaatcttaactgttgctgcaccaaaatcatttgctgatcttgtttcgctt
tgtggtttgtcgcatggaactaatgtgtgactaaacaacgcggaagatttaattttaaaa
aataacctaacacttagtgatgttgtgagttgtcgtgatgatattttggtaaagttaatg
gctttaaatgtaccgcgttcacaggcgtttgaaattatggaaaaagtgcggcatgctaag
aaaacgcttagtgctgaagatgaagcattgcttgtaaaacataatgtaccgcaatgacaa
attgaaagtatgaaaaaaattcagtacatgttccctaaagcccatgcggtagcatatgct
caaatggcttggtgaacggcttattacaaactttatttcccgcttgaattttatgctgtg
tacttttcaattcggactgatgtacttgatttggacaatatggttgatatgaagttcggc
accaaggcaaaaatgaaattacaccaaattaaacgggatgagcaaaatcgttcaattagt
accactgatgaaaagttattaccaatttttgaaatttgtcaagaactttacgcgagagga
tattacattgacaatgtttccttaacaaattcagaagctgtaacttgaaaagtagaccat
caacgtggttgcttaatcccgccttttaatgctgttaaacaacttggtgaagcagtggca
aattcaattgtcaaagcacgcgaagaaaaaccatttaagtcaattgaagatttcactaaa
cgaactttaacaaattcatcattgattaaaaaacttgaagaaatgaatgtttttgaaaat
ttagatcaaaccaaccaaatgcaattaaatattttgtaa
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integrated database retrieval system
