Mastomys coucha (southern multimammate mouse): 116068000
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Entry
116068000 CDS
T07224
Symbol
Pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116068000 (Pkd2)
04040 Ion channels [BR:
mcoc04040
]
116068000 (Pkd2)
Cilium and associated proteins [BR:
mcoc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116068000 (Pkd2)
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116068000 (Pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
116068000
NCBI-ProteinID:
XP_031192915
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MVNSSRVQPQPPGDPGRSPAPRASGPGRLVAGGAGLAVPGGLREQRGLDIEMERIRQAAA
RDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEDDDDDEVEGEEGGMVVEMDVEWRPGS
RRSAASSAVSSAGARGRGLGSYRGAAHPSGRRRRLEDQGAPCPSPAGGGDPLHRHLPLDG
QPPRVAWAERLVRGLRGLWGTRLMEESNTNREKYLKSVLRELVTYLFFLIVLCILTYGMM
SSSVYYYTRTLSQLFLDTPVSKTEKTNFKTLSSMEDFWKFTEGSFLDGLYWKAPTNNHTQ
ADNRSFIFYENLLLGVPRLRQLRVRNGSCSIPQDLRDEIKECYDVYSVSSEDRDPFGPRN
GTAWIYTTEKELNGSSHWGIIASYSGAGYYLDLSRNREETAAQLAGLRRNFWLDRGTRAA
FIDFSVYNANINLFCVVRLLVEFPATGGVVPSWQFQPVKLIHYVTAFDFFLAACEVIFCF
FILYYVVEEILEIRIHRLSYFRSFWNCLDVVIVVLSVVAMVINIYQMSNAEGLLQFLEDQ
NSFPNFEHVAYWQIQFNNIAAVMVFLVWIKLFKFINFNRTMSQLSTTMSRCAKELFGFTV
MFAIVFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEMEEANRVLGPLYFT
TFVFFMFFILLNMFLAIINDSYSEVKSDLAQQKAEMELSDLIRKGCQKALVKLKLKRNTV
DAISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEREHQQMRDDL
EKEREDLDLEHSSLPRPMSSRSFPRSLDDSEEEDDEDSGHSSRRRGSISSGVSYEEFQVL
VRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDARLGRDSEIHR
EQMERLVREELERWESDDAASQTGHGVGTQVGLGGQPHPRSSHPPSSQSAEGLEDGGGNG
SANVHV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactccagccgcgtgcagccgcagccgcccggagacccggggcgctcgcccgcg
ccgcgagcgtccgggcccgggcgcttggtggcgggaggcgccggcctggctgtccccggc
ggcctccgggagcagcggggcctggatatcgagatggagcgcatccggcaggcggccgct
cgggaccccccggccggagcctcggcctcgccatcccctccgctttcatcctgctccagg
caggcgtggagccgcgacaacccgggctttgaggcagaggaggatgacgacgacgacgag
gtggaaggagaagaaggagggatggtggtggagatggacgtggagtggcgacccggcagc
cgaaggtcggccgcctcctcggcggtgagctcggcgggcgcccgcggccgggggctgggg
agctaccgcggcgcggctcacccgagcgggaggcggcgccgtctagaggaccagggtgct
ccgtgtcccagccccgcgggcggcggggacccgctgcatcgccacctcccgctagacggc
cagccgccccgagtggcctgggcagagagactggtgcgcgggctgcgaggtctctgggga
acaagactcatggaagagagcaacactaaccgagagaagtacctgaaaagtgtgttacgg
gagctggtcacttatctctttttcctcatagtcttgtgcatcttgacctatggcatgatg
agctccagtgtgtactactacactcggacactgtcacagctgttcttagataccccagtg
tcaaaaacagagaaaaccaactttaaaactctttcttccatggaggacttctggaagttc
actgaaggctccttcctggatgggctgtactggaaggccccgaccaacaaccacacgcaa
gctgacaaccgaagctttattttctatgagaacttgctgctaggagtgccgcgtctacgc
caactccgagtcagaaacggatcctgctccatccctcaggacctgagagatgaaattaaa
gagtgctatgatgtctactctgtcagcagtgaggacagggatccattcggacctcggaac
ggaaccgcgtggatctacacaactgaaaaggagctgaacgggagcagtcactggggaatc
atagcatcttacagcggagcaggctactacctggatctgtccagaaacagggaagagaca
gcggcccagcttgctggccttaggaggaacttctggctggaccggggcactcgggcagct
ttcattgacttctcggtgtataacgcaaacattaacctgttctgtgtggtcaggttattg
gttgagttcccagcgacaggtggtgtggtgccttcttggcagtttcagcctgtaaaactt
atccactacgtcacagcctttgatttcttcctggctgcctgtgaggtcatcttctgtttc
tttatcctttactatgtggtggaagagatattggagattcgcattcacagactgagctat
ttcaggagtttctggaattgtctggatgttgtgattgttgtgttatctgtagtagctatg
gtgattaacatttaccaaatgtcaaatgcagaggggctcctacagtttctcgaagatcaa
aattctttccccaactttgagcatgtggcatactggcaaatacagttcaacaatatagct
gctgtcatggtgtttttggtctggattaagctcttcaaattcatcaattttaataggacc
atgagccagctctccacaaccatgtctcgatgtgccaaagagctctttggcttcaccgtc
atgttcgccatcgtcttcttggcgtatgctcagctggcgtaccttgtctttggcacgcag
gttgatgacttcagtactttccaagagtgtatcttcacccagttccgcatcattttgggt
gatatcaacttcgcagagatggaggaagctaaccgagttttggggccactttattttact
acatttgtgttctttatgttcttcattcttttgaatatgttcctggcaatcatcaatgat
tcctactctgaagtgaaatcagatctggcccagcagaaagcagaaatggaactctcagac
cttatcagaaagggctgccaaaaagcactggtcaaactaaaacttaaaagaaacacagta
gatgccatttcagaaagtctccggcaaggtggcggcaagctaaactttgatgaacttcgg
caagacctgaaagggaagggccatacagatgctgaaattgaggccatattcactaagtat
gaccaggacggcgaccaggaactgactgagcgtgagcatcagcagatgagagatgacctg
gagaaagagagggaggacctagacttggaacacagctctttaccacgtcccatgagcagc
agaagtttccccagaagcctggatgactctgaggaggaggacgatgaagacagcggccat
agttccaggaggagggggagtatctccagtggggtttcctatgaagagttccaagtacta
gtgagacgtgtggaccgcatggagcactccattggcagcattgtgtccaagattgatgct
gtgattgtcaagcttgagatcatggagcgggccaagttgaagagacgagaggtgttagga
cggctgctggatggagtggctgaggatgcgcgactgggtcgggacagtgagatccacagg
gagcagatggagcgtctggtgcgggaagagctggagcgctgggaatccgatgatgcagct
tctcagacaggtcatggtgtaggcacacaagtgggacttggtggccagccacaccccaga
agctcgcaccctccttcctcccagtctgcagagggcctggaagatggaggtggaaacgga
agtgccaatgttcatgtgtaa
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integrated database retrieval system
